Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.98□□□□□ -0.49
COLCA2A8K830 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
COLCA2A8K830 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.98□□□□□ -0.49
COLCA2A8K830 AC131009.4-201ENST00000624048 1740 ntBASIC11.98□□□□□ -0.49
COLCA2A8K830 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
COLCA2A8K830 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
COLCA2A8K830 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.98□□□□□ -0.49
COLCA2A8K830 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.98□□□□□ -0.49
COLCA2A8K830 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.98□□□□□ -0.49
COLCA2A8K830 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.98□□□□□ -0.49
COLCA2A8K830 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.98□□□□□ -0.49
COLCA2A8K830 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 AC073195.1-201ENST00000607241 877 ntBASIC11.98□□□□□ -0.49
COLCA2A8K830 AC083880.1-201ENST00000608266 535 ntBASIC11.98□□□□□ -0.49
COLCA2A8K830 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
COLCA2A8K830 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
COLCA2A8K830 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
COLCA2A8K830 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.98□□□□□ -0.49
COLCA2A8K830 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COLCA2A8K830 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
COLCA2A8K830 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.97□□□□□ -0.49
COLCA2A8K830 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 AP001282.1-201ENST00000531301 1499 ntBASIC11.97□□□□□ -0.49
COLCA2A8K830 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 METTL15-202ENST00000403099 795 ntTSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 AC004911.1-201ENST00000416316 871 ntBASIC11.97□□□□□ -0.49
COLCA2A8K830 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC11.97□□□□□ -0.49
COLCA2A8K830 AC009947.2-201ENST00000444014 672 ntBASIC11.97□□□□□ -0.49
COLCA2A8K830 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC11.97□□□□□ -0.49
COLCA2A8K830 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC11.97□□□□□ -0.49
COLCA2A8K830 MIR4313-201ENST00000580760 101 ntBASIC11.97□□□□□ -0.49
COLCA2A8K830 CYP2A7P1-201ENST00000595391 815 ntBASIC11.97□□□□□ -0.49
COLCA2A8K830 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC11.97□□□□□ -0.49
COLCA2A8K830 AC110285.5-201ENST00000611501 352 ntBASIC11.97□□□□□ -0.49
COLCA2A8K830 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
COLCA2A8K830 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
COLCA2A8K830 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.97□□□□□ -0.49
COLCA2A8K830 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.97□□□□□ -0.49
COLCA2A8K830 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.97□□□□□ -0.49
COLCA2A8K830 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
COLCA2A8K830 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms