Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 AL121772.3-201ENST00000610840 674 ntBASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRDV1A0A1B0GX56 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 AC005252.3-201ENST00000623855 2258 ntBASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 RPS8P6-201ENST00000426177 609 ntBASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 AC098859.1-201ENST00000502915 1238 ntBASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 AC105339.3-201ENST00000560043 636 ntBASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 AC097359.2-201ENST00000604992 2389 ntBASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRDV1A0A1B0GX56 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms