Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN1BQ07699 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SCN1BQ07699 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCN1BQ07699 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.07□□□□□ -0.16
SCN1BQ07699 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SCN1BQ07699 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN1BQ07699 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCN1BQ07699 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN1BQ07699 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN1BQ07699 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN1BQ07699 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SCN1BQ07699 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
SCN1BQ07699 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.06□□□□□ -0.16
SCN1BQ07699 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SCN1BQ07699 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SCN1BQ07699 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.06□□□□□ -0.16
SCN1BQ07699 AC009090.5-201ENST00000624886 2285 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 AC004870.1-201ENST00000315132 882 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 MRPL20P1-201ENST00000400819 433 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 KRT18P67-201ENST00000432816 1264 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.06□□□□□ -0.16
SCN1BQ07699 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 AC092910.1-201ENST00000482027 1129 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 AC107918.2-201ENST00000530817 355 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.06□□□□□ -0.16
SCN1BQ07699 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SCN1BQ07699 AC012640.2-201ENST00000561606 901 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 RN7SL510P-201ENST00000581311 263 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.06□□□□□ -0.16
SCN1BQ07699 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 AC020765.3-201ENST00000613051 740 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 AC004790.2-201ENST00000623588 572 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SCN1BQ07699 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.06□□□□□ -0.16
SCN1BQ07699 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
SCN1BQ07699 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.06□□□□□ -0.16
SCN1BQ07699 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.06□□□□□ -0.16
SCN1BQ07699 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
SCN1BQ07699 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SCN1BQ07699 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN1BQ07699 AC140479.7-201ENST00000636301 2332 ntBASIC14.06□□□□□ -0.16
SCN1BQ07699 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.05□□□□□ -0.16
SCN1BQ07699 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.05□□□□□ -0.16
SCN1BQ07699 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.05□□□□□ -0.16
SCN1BQ07699 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.05□□□□□ -0.16
SCN1BQ07699 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.05□□□□□ -0.16
SCN1BQ07699 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.05□□□□□ -0.16
SCN1BQ07699 AC079781.3-201ENST00000449110 356 ntBASIC14.05□□□□□ -0.16
SCN1BQ07699 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.05□□□□□ -0.16
SCN1BQ07699 AC005412.3-201ENST00000580309 715 ntBASIC14.05□□□□□ -0.16
SCN1BQ07699 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.05□□□□□ -0.16
SCN1BQ07699 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SCN1BQ07699 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 REXO1L1P-202ENST00000608646 1974 ntBASIC14.05□□□□□ -0.16
SCN1BQ07699 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
SCN1BQ07699 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms