Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 AC068760.1-201ENST00000493579 1953 ntBASIC16.42■□□□□ 0.22
CBX1P83916 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX1P83916 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX1P83916 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CBX1P83916 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX1P83916 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CBX1P83916 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX1P83916 AC015818.8-201ENST00000587907 1519 ntBASIC16.42■□□□□ 0.22
CBX1P83916 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX1P83916 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CBX1P83916 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.42■□□□□ 0.22
CBX1P83916 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 AC103564.2-201ENST00000432853 1299 ntBASIC16.42■□□□□ 0.22
CBX1P83916 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX1P83916 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.42■□□□□ 0.22
CBX1P83916 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.42■□□□□ 0.22
CBX1P83916 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.42■□□□□ 0.22
CBX1P83916 AC005332.3-201ENST00000589904 676 ntBASIC16.42■□□□□ 0.22
CBX1P83916 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CBX1P83916 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CBX1P83916 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.42■□□□□ 0.22
CBX1P83916 VENTXP1-201ENST00000569334 2716 ntBASIC16.42■□□□□ 0.22
CBX1P83916 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CBX1P83916 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CBX1P83916 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CBX1P83916 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX1P83916 AL353593.2-201ENST00000602529 1483 ntBASIC16.42■□□□□ 0.22
CBX1P83916 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX1P83916 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 TRIM80P-201ENST00000455685 2848 ntBASIC16.41■□□□□ 0.22
CBX1P83916 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX1P83916 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX1P83916 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
CBX1P83916 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CBX1P83916 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CBX1P83916 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX1P83916 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX1P83916 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX1P83916 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX1P83916 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX1P83916 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CBX1P83916 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.41■□□□□ 0.22
CBX1P83916 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CBX1P83916 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.41■□□□□ 0.22
CBX1P83916 SLC25A1P2-201ENST00000430693 912 ntBASIC16.41■□□□□ 0.22
CBX1P83916 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CBX1P83916 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CBX1P83916 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX1P83916 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CBX1P83916 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 AC015802.1-201ENST00000588104 1449 ntBASIC16.41■□□□□ 0.22
CBX1P83916 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX1P83916 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CBX1P83916 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CBX1P83916 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CBX1P83916 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CBX1P83916 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX1P83916 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CBX1P83916 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX1P83916 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX1P83916 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CBX1P83916 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CBX1P83916 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX1P83916 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX1P83916 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CBX1P83916 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms