Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC42P60953 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC42P60953 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CDC42P60953 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 AP002414.3-201ENST00000589352 1468 ntBASIC14.4□□□□□ -0.1
CDC42P60953 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CDC42P60953 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.4□□□□□ -0.1
CDC42P60953 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC42P60953 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.4□□□□□ -0.1
CDC42P60953 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDC42P60953 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.4□□□□□ -0.1
CDC42P60953 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 AC024267.1-201ENST00000582320 895 ntBASIC14.4□□□□□ -0.1
CDC42P60953 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42P60953 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CDC42P60953 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.4□□□□□ -0.1
CDC42P60953 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42P60953 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CDC42P60953 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC42P60953 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDC42P60953 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 RPS2P28-201ENST00000314255 741 ntBASIC14.39□□□□□ -0.11
CDC42P60953 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC42P60953 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 FAM8A3P-201ENST00000427218 844 ntBASIC14.39□□□□□ -0.11
CDC42P60953 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.39□□□□□ -0.11
CDC42P60953 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 RNPS1P1-201ENST00000507437 918 ntBASIC14.39□□□□□ -0.11
CDC42P60953 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.39□□□□□ -0.11
CDC42P60953 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC42P60953 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC42P60953 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CDC42P60953 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC42P60953 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42P60953 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC42P60953 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC42P60953 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms