Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.26■□□□□ 0.35
RFC5P40937 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.26■□□□□ 0.35
RFC5P40937 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC5P40937 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC5P40937 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC5P40937 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.26■□□□□ 0.35
RFC5P40937 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC5P40937 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
RFC5P40937 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFC5P40937 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.26■□□□□ 0.35
RFC5P40937 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.26■□□□□ 0.35
RFC5P40937 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC5P40937 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.26■□□□□ 0.35
RFC5P40937 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFC5P40937 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.26■□□□□ 0.35
RFC5P40937 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.26■□□□□ 0.35
RFC5P40937 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC5P40937 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.26■□□□□ 0.35
RFC5P40937 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFC5P40937 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RFC5P40937 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC5P40937 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFC5P40937 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
RFC5P40937 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.25■□□□□ 0.35
RFC5P40937 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.25■□□□□ 0.35
RFC5P40937 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.25■□□□□ 0.35
RFC5P40937 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.25■□□□□ 0.35
RFC5P40937 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.25■□□□□ 0.35
RFC5P40937 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.25■□□□□ 0.35
RFC5P40937 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 GAPDHP40-201ENST00000505218 1006 ntBASIC17.25■□□□□ 0.35
RFC5P40937 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.25■□□□□ 0.35
RFC5P40937 AC093813.1-201ENST00000605066 256 ntBASIC17.25■□□□□ 0.35
RFC5P40937 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.25■□□□□ 0.35
RFC5P40937 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.25■□□□□ 0.35
RFC5P40937 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC5P40937 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RFC5P40937 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RFC5P40937 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.24■□□□□ 0.35
RFC5P40937 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC5P40937 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.24■□□□□ 0.35
RFC5P40937 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC5P40937 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
RFC5P40937 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC5P40937 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RFC5P40937 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC5P40937 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RFC5P40937 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.24■□□□□ 0.35
RFC5P40937 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC5P40937 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.24■□□□□ 0.35
RFC5P40937 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.24■□□□□ 0.35
RFC5P40937 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.24■□□□□ 0.35
RFC5P40937 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.24■□□□□ 0.35
RFC5P40937 AC015936.2-201ENST00000593177 259 ntBASIC17.24■□□□□ 0.35
RFC5P40937 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RFC5P40937 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.24■□□□□ 0.35
RFC5P40937 AC010319.3-201ENST00000597028 470 ntBASIC17.24■□□□□ 0.35
RFC5P40937 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.24■□□□□ 0.35
RFC5P40937 AC107373.2-201ENST00000607735 490 ntBASIC17.24■□□□□ 0.35
RFC5P40937 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.24■□□□□ 0.35
RFC5P40937 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC5P40937 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC5P40937 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC5P40937 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms