Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.43□□□□□ -0.1
SHC1P29353 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SHC1P29353 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.43□□□□□ -0.1
SHC1P29353 AL009178.2-201ENST00000597278 2719 ntBASIC14.43□□□□□ -0.1
SHC1P29353 AC020658.6-201ENST00000623564 1870 ntBASIC14.43□□□□□ -0.1
SHC1P29353 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 FAM45BP-202ENST00000592932 1624 ntBASIC14.43□□□□□ -0.1
SHC1P29353 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SHC1P29353 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
SHC1P29353 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SHC1P29353 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.43□□□□□ -0.1
SHC1P29353 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.43□□□□□ -0.1
SHC1P29353 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.42□□□□□ -0.1
SHC1P29353 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 AZGP1P1-201ENST00000411909 902 ntBASIC14.42□□□□□ -0.1
SHC1P29353 HIST3H2BA-201ENST00000436555 524 ntBASIC14.42□□□□□ -0.1
SHC1P29353 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 AL512361.1-201ENST00000554200 418 ntBASIC14.42□□□□□ -0.1
SHC1P29353 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 AL355385.1-201ENST00000606123 409 ntBASIC14.42□□□□□ -0.1
SHC1P29353 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.42□□□□□ -0.1
SHC1P29353 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SHC1P29353 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 KRT8P12-202ENST00000472924 1397 ntBASIC14.42□□□□□ -0.1
SHC1P29353 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 AL109954.1-202ENST00000564051 2148 ntBASIC14.42□□□□□ -0.1
SHC1P29353 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.42□□□□□ -0.1
SHC1P29353 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SHC1P29353 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
SHC1P29353 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHC1P29353 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 KRT8P37-201ENST00000451609 1420 ntBASIC14.41□□□□□ -0.1
SHC1P29353 AC100757.3-201ENST00000622361 1406 ntBASIC14.41□□□□□ -0.1
SHC1P29353 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SHC1P29353 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.41□□□□□ -0.1
SHC1P29353 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.41□□□□□ -0.1
SHC1P29353 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.41□□□□□ -0.1
SHC1P29353 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SHC1P29353 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SHC1P29353 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.41□□□□□ -0.1
SHC1P29353 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 1938.3 ms