Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
ERCC2P18074 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.13■□□□□ 0.17
ERCC2P18074 AL589987.1-201ENST00000453380 819 ntBASIC16.13■□□□□ 0.17
ERCC2P18074 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.13■□□□□ 0.17
ERCC2P18074 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.13■□□□□ 0.17
ERCC2P18074 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 AC015910.1-201ENST00000579400 975 ntBASIC16.13■□□□□ 0.17
ERCC2P18074 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
ERCC2P18074 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ERCC2P18074 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ERCC2P18074 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC2P18074 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ERCC2P18074 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 AC084364.1-201ENST00000551967 1556 ntBASIC16.13■□□□□ 0.17
ERCC2P18074 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.13■□□□□ 0.17
ERCC2P18074 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC2P18074 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC2P18074 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
ERCC2P18074 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ERCC2P18074 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
ERCC2P18074 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ERCC2P18074 INGX-202ENST00000489074 768 ntBASIC16.12■□□□□ 0.17
ERCC2P18074 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC2P18074 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
ERCC2P18074 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
ERCC2P18074 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC2P18074 SRD5A3P1-201ENST00000603021 949 ntBASIC16.12■□□□□ 0.17
ERCC2P18074 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
ERCC2P18074 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC2P18074 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
ERCC2P18074 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC2P18074 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC2P18074 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 TSPY26P-202ENST00000565928 3884 ntBASIC16.12■□□□□ 0.17
ERCC2P18074 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC2P18074 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC2P18074 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
ERCC2P18074 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ERCC2P18074 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC2P18074 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC2P18074 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ERCC2P18074 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 AC138969.3-201ENST00000546612 1459 ntBASIC16.11■□□□□ 0.17
ERCC2P18074 AC138932.2-201ENST00000548268 1459 ntBASIC16.11■□□□□ 0.17
ERCC2P18074 AC126755.4-201ENST00000549796 1459 ntBASIC16.11■□□□□ 0.17
ERCC2P18074 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC2P18074 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.11■□□□□ 0.17
ERCC2P18074 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ERCC2P18074 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 AL121723.1-201ENST00000445194 1519 ntBASIC16.11■□□□□ 0.17
ERCC2P18074 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC2P18074 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms