Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 AL109954.1-202ENST00000564051 2148 ntBASIC17.24■□□□□ 0.35
GAP43P17677 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.24■□□□□ 0.35
GAP43P17677 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 UGT1A2P-201ENST00000454886 866 ntBASIC17.24■□□□□ 0.35
GAP43P17677 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.24■□□□□ 0.35
GAP43P17677 RARRES2P5-201ENST00000564013 466 ntBASIC17.24■□□□□ 0.35
GAP43P17677 AC009118.2-201ENST00000613275 655 ntBASIC17.24■□□□□ 0.35
GAP43P17677 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GAP43P17677 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
GAP43P17677 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GAP43P17677 AC068587.6-202ENST00000641839 5619 ntBASIC17.24■□□□□ 0.35
GAP43P17677 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.24■□□□□ 0.35
GAP43P17677 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.24■□□□□ 0.35
GAP43P17677 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
GAP43P17677 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GAP43P17677 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GAP43P17677 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.23■□□□□ 0.35
GAP43P17677 MEP1AP4-201ENST00000423244 1087 ntBASIC17.23■□□□□ 0.35
GAP43P17677 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.23■□□□□ 0.35
GAP43P17677 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.23■□□□□ 0.35
GAP43P17677 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.23■□□□□ 0.35
GAP43P17677 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
GAP43P17677 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GAP43P17677 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
GAP43P17677 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GAP43P17677 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
GAP43P17677 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAP43P17677 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.23■□□□□ 0.35
GAP43P17677 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
GAP43P17677 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GAP43P17677 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GAP43P17677 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.22■□□□□ 0.35
GAP43P17677 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
GAP43P17677 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
GAP43P17677 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GAP43P17677 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GAP43P17677 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms