Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TPM2P07951 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TPM2P07951 AC126335.2-201ENST00000623362 4637 ntBASIC17.96■□□□□ 0.47
TPM2P07951 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
TPM2P07951 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TPM2P07951 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM2P07951 FGD5P1-202ENST00000614866 2498 ntBASIC17.95■□□□□ 0.46
TPM2P07951 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TPM2P07951 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
TPM2P07951 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM2P07951 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM2P07951 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.95■□□□□ 0.46
TPM2P07951 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM2P07951 HMGA1P7-201ENST00000406908 502 ntBASIC17.95■□□□□ 0.46
TPM2P07951 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.95■□□□□ 0.46
TPM2P07951 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TPM2P07951 KRT18P56-201ENST00000507275 550 ntBASIC17.95■□□□□ 0.46
TPM2P07951 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM2P07951 OR7E47P-204ENST00000575924 449 ntBASIC17.95■□□□□ 0.46
TPM2P07951 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TPM2P07951 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.95■□□□□ 0.46
TPM2P07951 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TPM2P07951 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM2P07951 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TPM2P07951 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM2P07951 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
TPM2P07951 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM2P07951 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM2P07951 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 AJ011931.1-201ENST00000618749 2492 ntBASIC17.94■□□□□ 0.46
TPM2P07951 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM2P07951 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM2P07951 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.94■□□□□ 0.46
TPM2P07951 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM2P07951 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
TPM2P07951 HNRNPDP1-201ENST00000439535 754 ntBASIC17.94■□□□□ 0.46
TPM2P07951 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 AC092910.1-201ENST00000482027 1129 ntBASIC17.94■□□□□ 0.46
TPM2P07951 AC108751.1-201ENST00000490852 363 ntBASIC17.94■□□□□ 0.46
TPM2P07951 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.94■□□□□ 0.46
TPM2P07951 AC012640.2-201ENST00000561606 901 ntBASIC17.94■□□□□ 0.46
TPM2P07951 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 AC117500.6-201ENST00000624871 588 ntBASIC17.94■□□□□ 0.46
TPM2P07951 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM2P07951 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM2P07951 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM2P07951 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM2P07951 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM2P07951 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC17.93■□□□□ 0.46
TPM2P07951 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.93■□□□□ 0.46
TPM2P07951 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.93■□□□□ 0.46
TPM2P07951 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TPM2P07951 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TPM2P07951 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM2P07951 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.93■□□□□ 0.46
TPM2P07951 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM2P07951 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms