Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.67■□□□□ 0.1
NDUFS3O75489 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NDUFS3O75489 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.67■□□□□ 0.1
NDUFS3O75489 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
NDUFS3O75489 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.67■□□□□ 0.1
NDUFS3O75489 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
NDUFS3O75489 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NDUFS3O75489 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.67■□□□□ 0.1
NDUFS3O75489 TARDBPP1-201ENST00000442013 1203 ntBASIC15.67■□□□□ 0.1
NDUFS3O75489 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.67■□□□□ 0.1
NDUFS3O75489 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.67■□□□□ 0.1
NDUFS3O75489 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.67■□□□□ 0.1
NDUFS3O75489 AL138828.2-201ENST00000615812 383 ntBASIC15.67■□□□□ 0.1
NDUFS3O75489 SPDYE12P-201ENST00000618416 771 ntBASIC15.67■□□□□ 0.1
NDUFS3O75489 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 AC073592.8-201ENST00000624126 511 ntBASIC15.67■□□□□ 0.1
NDUFS3O75489 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.67■□□□□ 0.1
NDUFS3O75489 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.67■□□□□ 0.1
NDUFS3O75489 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NDUFS3O75489 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NDUFS3O75489 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.67■□□□□ 0.1
NDUFS3O75489 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
NDUFS3O75489 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.67■□□□□ 0.1
NDUFS3O75489 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 KRT18P28-201ENST00000453838 1332 ntBASIC15.67■□□□□ 0.1
NDUFS3O75489 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFS3O75489 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 OR2I1P-209ENST00000641730 5365 ntBASIC15.66■□□□□ 0.1
NDUFS3O75489 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NDUFS3O75489 AC144831.1-201ENST00000573312 2656 ntBASIC15.66■□□□□ 0.1
NDUFS3O75489 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.66■□□□□ 0.1
NDUFS3O75489 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NDUFS3O75489 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.66■□□□□ 0.1
NDUFS3O75489 AC027369.6-201ENST00000525520 931 ntBASIC15.66■□□□□ 0.1
NDUFS3O75489 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.66■□□□□ 0.1
NDUFS3O75489 AC140878.1-201ENST00000565277 250 ntBASIC15.66■□□□□ 0.1
NDUFS3O75489 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 AC015911.4-201ENST00000588022 1070 ntBASIC15.66■□□□□ 0.1
NDUFS3O75489 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.66■□□□□ 0.1
NDUFS3O75489 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.66■□□□□ 0.1
NDUFS3O75489 DBET-201ENST00000630918 3363 ntBASIC15.66■□□□□ 0.1
NDUFS3O75489 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.66■□□□□ 0.1
NDUFS3O75489 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.66■□□□□ 0.1
NDUFS3O75489 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDUFS3O75489 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.65■□□□□ 0.1
NDUFS3O75489 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDUFS3O75489 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDUFS3O75489 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NDUFS3O75489 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.65■□□□□ 0.1
NDUFS3O75489 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDUFS3O75489 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDUFS3O75489 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
NDUFS3O75489 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms