Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.31■□□□□ 0.04
YBX1P67809 FO393414.2-201ENST00000405153 598 ntBASIC15.31■□□□□ 0.04
YBX1P67809 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.31■□□□□ 0.04
YBX1P67809 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
YBX1P67809 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 KRT18P64-201ENST00000434946 1219 ntBASIC15.31■□□□□ 0.04
YBX1P67809 TARDBPP1-201ENST00000442013 1203 ntBASIC15.31■□□□□ 0.04
YBX1P67809 BCRP1-201ENST00000444246 691 ntBASIC15.31■□□□□ 0.04
YBX1P67809 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.31■□□□□ 0.04
YBX1P67809 RN7SL618P-201ENST00000477850 296 ntBASIC15.31■□□□□ 0.04
YBX1P67809 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.31■□□□□ 0.04
YBX1P67809 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 SPCS2P1-201ENST00000561636 679 ntBASIC15.31■□□□□ 0.04
YBX1P67809 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.31■□□□□ 0.04
YBX1P67809 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.31■□□□□ 0.04
YBX1P67809 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.31■□□□□ 0.04
YBX1P67809 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.31■□□□□ 0.04
YBX1P67809 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
YBX1P67809 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.31■□□□□ 0.04
YBX1P67809 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.31■□□□□ 0.04
YBX1P67809 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.31■□□□□ 0.04
YBX1P67809 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YBX1P67809 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.31■□□□□ 0.04
YBX1P67809 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
YBX1P67809 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
YBX1P67809 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
YBX1P67809 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.3■□□□□ 0.04
YBX1P67809 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
YBX1P67809 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
YBX1P67809 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.3■□□□□ 0.04
YBX1P67809 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
YBX1P67809 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.3■□□□□ 0.04
YBX1P67809 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.3■□□□□ 0.04
YBX1P67809 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
YBX1P67809 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.3■□□□□ 0.04
YBX1P67809 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 AC022144.1-201ENST00000602255 1580 ntBASIC15.3■□□□□ 0.04
YBX1P67809 LINC01115-203ENST00000606068 577 ntBASIC15.3■□□□□ 0.04
YBX1P67809 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.3■□□□□ 0.04
YBX1P67809 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
YBX1P67809 MIR6069-201ENST00000620069 79 ntBASIC15.3■□□□□ 0.04
YBX1P67809 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.3■□□□□ 0.04
YBX1P67809 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.3■□□□□ 0.04
YBX1P67809 AF228730.6-201ENST00000641497 218 ntBASIC15.3■□□□□ 0.04
YBX1P67809 AC084121.3-201ENST00000641716 218 ntBASIC15.3■□□□□ 0.04
YBX1P67809 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
YBX1P67809 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YBX1P67809 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.3■□□□□ 0.04
YBX1P67809 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
YBX1P67809 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.29■□□□□ 0.04
YBX1P67809 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.29■□□□□ 0.04
YBX1P67809 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms