Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PDE6CP51160 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6CP51160 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 PPT1-215ENST00000641471 2368 ntBASIC17.01■□□□□ 0.31
PDE6CP51160 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6CP51160 AC087481.3-201ENST00000602886 1894 ntBASIC17.01■□□□□ 0.31
PDE6CP51160 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6CP51160 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
PDE6CP51160 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17■□□□□ 0.31
PDE6CP51160 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDE6CP51160 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17■□□□□ 0.31
PDE6CP51160 AC087499.5-201ENST00000452760 1342 ntBASIC17■□□□□ 0.31
PDE6CP51160 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17■□□□□ 0.31
PDE6CP51160 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17■□□□□ 0.31
PDE6CP51160 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17■□□□□ 0.31
PDE6CP51160 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17■□□□□ 0.31
PDE6CP51160 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17■□□□□ 0.31
PDE6CP51160 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17■□□□□ 0.31
PDE6CP51160 PHKG1P2-201ENST00000457537 863 ntBASIC17■□□□□ 0.31
PDE6CP51160 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17■□□□□ 0.31
PDE6CP51160 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17■□□□□ 0.31
PDE6CP51160 BANF1P1-201ENST00000553684 263 ntBASIC17■□□□□ 0.31
PDE6CP51160 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17■□□□□ 0.31
PDE6CP51160 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17■□□□□ 0.31
PDE6CP51160 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17■□□□□ 0.31
PDE6CP51160 MIR4313-201ENST00000580760 101 ntBASIC17■□□□□ 0.31
PDE6CP51160 LINC02560-201ENST00000596379 459 ntBASIC17■□□□□ 0.31
PDE6CP51160 TMBIM7P-203ENST00000641617 1718 ntBASIC17■□□□□ 0.31
PDE6CP51160 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17■□□□□ 0.31
PDE6CP51160 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17■□□□□ 0.31
PDE6CP51160 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17■□□□□ 0.31
PDE6CP51160 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 AC105250.1-201ENST00000509378 2057 ntBASIC17■□□□□ 0.31
PDE6CP51160 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6CP51160 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17■□□□□ 0.31
PDE6CP51160 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
PDE6CP51160 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
PDE6CP51160 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PDE6CP51160 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PDE6CP51160 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.99■□□□□ 0.31
PDE6CP51160 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PDE6CP51160 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.99■□□□□ 0.31
PDE6CP51160 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.99■□□□□ 0.31
PDE6CP51160 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 TSSK5P-201ENST00000423978 907 ntBASIC16.99■□□□□ 0.31
PDE6CP51160 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.99■□□□□ 0.31
PDE6CP51160 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.99■□□□□ 0.31
PDE6CP51160 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.99■□□□□ 0.31
PDE6CP51160 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.99■□□□□ 0.31
PDE6CP51160 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.99■□□□□ 0.31
PDE6CP51160 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.99■□□□□ 0.31
PDE6CP51160 TEX28P1-201ENST00000613479 1221 ntBASIC16.99■□□□□ 0.31
PDE6CP51160 TEX28P2-201ENST00000617764 1221 ntBASIC16.99■□□□□ 0.31
PDE6CP51160 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.99■□□□□ 0.31
PDE6CP51160 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.99■□□□□ 0.31
PDE6CP51160 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms