Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.01□□□□□ -0.33
SNCAP37840 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.01□□□□□ -0.33
SNCAP37840 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.01□□□□□ -0.33
SNCAP37840 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13□□□□□ -0.33
SNCAP37840 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13□□□□□ -0.33
SNCAP37840 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13□□□□□ -0.33
SNCAP37840 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SNCAP37840 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SNCAP37840 AC006504.5-208ENST00000588784 2401 ntBASIC13□□□□□ -0.33
SNCAP37840 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SNCAP37840 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SNCAP37840 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SNCAP37840 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13□□□□□ -0.33
SNCAP37840 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SNCAP37840 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 AP002414.3-201ENST00000589352 1468 ntBASIC13□□□□□ -0.33
SNCAP37840 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13□□□□□ -0.33
SNCAP37840 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SNCAP37840 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13□□□□□ -0.33
SNCAP37840 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SNCAP37840 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13□□□□□ -0.33
SNCAP37840 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13□□□□□ -0.33
SNCAP37840 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13□□□□□ -0.33
SNCAP37840 MIR3909-201ENST00000579518 119 ntBASIC13□□□□□ -0.33
SNCAP37840 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
SNCAP37840 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13□□□□□ -0.33
SNCAP37840 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SNCAP37840 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13□□□□□ -0.33
SNCAP37840 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SNCAP37840 FGD5P1-202ENST00000614866 2498 ntBASIC13□□□□□ -0.33
SNCAP37840 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13□□□□□ -0.33
SNCAP37840 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SNCAP37840 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SNCAP37840 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.99□□□□□ -0.33
SNCAP37840 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
SNCAP37840 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCAP37840 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCAP37840 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.99□□□□□ -0.33
SNCAP37840 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms