Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 SPDYE17-201ENST00000412399 783 ntBASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 AL627223.1-201ENST00000416693 442 ntBASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 FAM58DP-201ENST00000428076 619 ntBASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 AL671883.3-201ENST00000603274 991 ntBASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HNRNPCL4P0DMR1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 AC004461.1-201ENST00000412461 403 ntBASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 BANF1P1-201ENST00000553684 263 ntBASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 MIR4469-201ENST00000583919 79 ntBASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 AC003101.2-201ENST00000612557 442 ntBASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HNRNPCL4P0DMR1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 AL035456.1-201ENST00000456064 1369 ntBASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 RBPMS2P1-201ENST00000437762 623 ntBASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 AP000344.2-201ENST00000512987 629 ntBASIC14.62□□□□□ -0.07
HNRNPCL4P0DMR1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms