Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PFDN1O60925 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
PFDN1O60925 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PFDN1O60925 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.01□□□□□ -0.17
PFDN1O60925 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.01□□□□□ -0.17
PFDN1O60925 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.01□□□□□ -0.17
PFDN1O60925 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 BNIP3P1-202ENST00000550043 1585 ntBASIC14□□□□□ -0.17
PFDN1O60925 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
PFDN1O60925 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14□□□□□ -0.17
PFDN1O60925 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 AC068760.1-201ENST00000493579 1953 ntBASIC14□□□□□ -0.17
PFDN1O60925 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PFDN1O60925 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 POM121L4P-202ENST00000427789 1891 ntBASIC14□□□□□ -0.17
PFDN1O60925 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14□□□□□ -0.17
PFDN1O60925 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14□□□□□ -0.17
PFDN1O60925 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14□□□□□ -0.17
PFDN1O60925 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PFDN1O60925 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14□□□□□ -0.17
PFDN1O60925 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
PFDN1O60925 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14□□□□□ -0.17
PFDN1O60925 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC14□□□□□ -0.17
PFDN1O60925 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PFDN1O60925 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PFDN1O60925 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14□□□□□ -0.17
PFDN1O60925 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 PCDHB17P-202ENST00000623466 3066 ntBASIC13.99□□□□□ -0.17
PFDN1O60925 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PFDN1O60925 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PFDN1O60925 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.99□□□□□ -0.17
PFDN1O60925 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.99□□□□□ -0.17
PFDN1O60925 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.99□□□□□ -0.17
PFDN1O60925 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.99□□□□□ -0.17
PFDN1O60925 UNC93B4-201ENST00000505679 747 ntBASIC13.99□□□□□ -0.17
PFDN1O60925 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.99□□□□□ -0.17
PFDN1O60925 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.99□□□□□ -0.17
PFDN1O60925 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.99□□□□□ -0.17
PFDN1O60925 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.99□□□□□ -0.17
PFDN1O60925 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.99□□□□□ -0.17
PFDN1O60925 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.99□□□□□ -0.17
PFDN1O60925 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
PFDN1O60925 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PFDN1O60925 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.99□□□□□ -0.17
PFDN1O60925 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.99□□□□□ -0.17
PFDN1O60925 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.99□□□□□ -0.17
PFDN1O60925 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms