Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 AC018442.1-201ENST00000421439 2061 ntBASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 AL645728.1-201ENST00000366221 2101 ntBASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 PCDHB17P-202ENST00000623466 3066 ntBASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 MIR3180-4-201ENST00000582223 153 ntBASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 TRIR-205ENST00000592273 783 ntTSL 3 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 AC110285.6-201ENST00000617652 491 ntBASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 AC231657.2-201ENST00000624556 255 ntBASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHKB-CPT1BH3BT56 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms