RNA–Protein interactions for RNA: ENST00000368761.9

TRAF3IP2-207, Transcript of TRAF3 interacting protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP2, Length 5,128 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-207ENST00000368761 MYT1Q01538 1121 aa18.56■□□□□ 0.56
TRAF3IP2-207ENST00000368761 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
TRAF3IP2-207ENST00000368761 DCAF8L2P0C7V8 631 aa17.61■□□□□ 0.41
TRAF3IP2-207ENST00000368761 TTBK1Q5TCY1 1321 aaPredicted RBP17.28■□□□□ 0.36
TRAF3IP2-207ENST00000368761 ERICH6Q7L0X2 663 aa17.16■□□□□ 0.34
TRAF3IP2-207ENST00000368761 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.32
TRAF3IP2-207ENST00000368761 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.31
TRAF3IP2-207ENST00000368761 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
TRAF3IP2-207ENST00000368761 YTHDC1Q96MU7 727 aaKnown RBP16.63■□□□□ 0.25
TRAF3IP2-207ENST00000368761 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.22
TRAF3IP2-207ENST00000368761 FAM9AQ8IZU1 332 aaPredicted RBP16.26■□□□□ 0.19
TRAF3IP2-207ENST00000368761 NEFLP07196 543 aa16.23■□□□□ 0.19
TRAF3IP2-207ENST00000368761 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
TRAF3IP2-207ENST00000368761 GLIPR1L2Q4G1C9 344 aa16.04■□□□□ 0.16
TRAF3IP2-207ENST00000368761 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
TRAF3IP2-207ENST00000368761 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.14
TRAF3IP2-207ENST00000368761 HRCP23327 699 aa15.86■□□□□ 0.13
TRAF3IP2-207ENST00000368761 ABCC9O60706 1549 aa15.86■□□□□ 0.13
TRAF3IP2-207ENST00000368761 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
TRAF3IP2-207ENST00000368761 EIF5BO60841 1220 aaKnown RBP15.75■□□□□ 0.11
TRAF3IP2-207ENST00000368761 SUPT5HO00267 1087 aaKnown RBP15.72■□□□□ 0.11
TRAF3IP2-207ENST00000368761 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
TRAF3IP2-207ENST00000368761 GTF3C3Q9Y5Q9 886 aa15.51■□□□□ 0.07
TRAF3IP2-207ENST00000368761 APLP2Q06481 763 aa15.5■□□□□ 0.07
TRAF3IP2-207ENST00000368761 ZNF316A6NFI3 1004 aaPredicted RBP15.49■□□□□ 0.07
TRAF3IP2-207ENST00000368761 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRAF3IP2-207ENST00000368761 SLC24A1O60721 1099 aa15.35■□□□□ 0.05
TRAF3IP2-207ENST00000368761 BCL11AQ9H165 835 aa15.34■□□□□ 0.05
TRAF3IP2-207ENST00000368761 ACIN1Q9UKV3 1341 aaKnown RBP15.28■□□□□ 0.04
TRAF3IP2-207ENST00000368761 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.03
TRAF3IP2-207ENST00000368761 CDK11AQ9UQ88 783 aaPredicted RBP15.27■□□□□ 0.03
TRAF3IP2-207ENST00000368761 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
TRAF3IP2-207ENST00000368761 AEBP2Q6ZN18 517 aaPredicted RBP15.24■□□□□ 0.03
TRAF3IP2-207ENST00000368761 PPARGC1BQ86YN6 1023 aaKnown RBP15.21■□□□□ 0.02
TRAF3IP2-207ENST00000368761 DIEXFQ68CQ4 756 aaKnown RBP15.2■□□□□ 0.02
TRAF3IP2-207ENST00000368761 CLSPNQ9HAW4 1339 aa15.16■□□□□ 0.02
TRAF3IP2-207ENST00000368761 ANP32EQ9BTT0 268 aa15.13■□□□□ 0.01
TRAF3IP2-207ENST00000368761 TNNT2P45379 298 aaPredicted RBP15.13■□□□□ 0.01
TRAF3IP2-207ENST00000368761 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
TRAF3IP2-207ENST00000368761 BCANQ96GW7 911 aa15.03■□□□□ -0
TRAF3IP2-207ENST00000368761 ANP32BQ92688 251 aaKnown RBP15□□□□□ -0.01
TRAF3IP2-207ENST00000368761 CDK11BP21127 795 aaKnown RBP14.98□□□□□ -0.01
TRAF3IP2-207ENST00000368761 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRAF3IP2-207ENST00000368761 NCLP19338 710 aaKnown RBP14.97□□□□□ -0.01
TRAF3IP2-207ENST00000368761 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
TRAF3IP2-207ENST00000368761 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
TRAF3IP2-207ENST00000368761 FBLN2P98095 1184 aa14.93□□□□□ -0.02
TRAF3IP2-207ENST00000368761 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
TRAF3IP2-207ENST00000368761 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
TRAF3IP2-207ENST00000368761 TRIM44Q96DX7 344 aaPredicted RBP14.88□□□□□ -0.03
TRAF3IP2-207ENST00000368761 ERICH6BQ5W0A0 696 aa14.83□□□□□ -0.03
TRAF3IP2-207ENST00000368761 NBR1Q14596 966 aa14.82□□□□□ -0.04
TRAF3IP2-207ENST00000368761 ERCC6Q03468 1493 aa14.8□□□□□ -0.04
TRAF3IP2-207ENST00000368761 RB1CC1Q8TDY2 1594 aa14.76□□□□□ -0.05
TRAF3IP2-207ENST00000368761 POLR3GLQ9BT43 218 aa14.76□□□□□ -0.05
TRAF3IP2-207ENST00000368761 ZBTB47Q9UFB7 747 aaPredicted RBP14.76□□□□□ -0.05
TRAF3IP2-207ENST00000368761 PRKCSHP14314 528 aaPredicted RBP14.75□□□□□ -0.05
TRAF3IP2-207ENST00000368761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
TRAF3IP2-207ENST00000368761 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
TRAF3IP2-207ENST00000368761 ZNF326Q5BKZ1 582 aaKnown RBP14.7□□□□□ -0.06
TRAF3IP2-207ENST00000368761 ESF1Q9H501 851 aaKnown RBP14.67□□□□□ -0.06
TRAF3IP2-207ENST00000368761 NAP1L5Q96NT1 182 aaPredicted RBP14.67□□□□□ -0.06
TRAF3IP2-207ENST00000368761 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
TRAF3IP2-207ENST00000368761 NPM2Q86SE8 214 aaKnown RBP14.66□□□□□ -0.06
TRAF3IP2-207ENST00000368761 PODXL2Q9NZ53 605 aa14.65□□□□□ -0.06
TRAF3IP2-207ENST00000368761 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
TRAF3IP2-207ENST00000368761 RTN4Q9NQC3 1192 aaKnown RBP14.63□□□□□ -0.07
TRAF3IP2-207ENST00000368761 NEFMP07197 916 aa14.6□□□□□ -0.07
TRAF3IP2-207ENST00000368761 FKBP8Q14318 412 aa14.59□□□□□ -0.07
TRAF3IP2-207ENST00000368761 HSP90AA1P07900 732 aaKnown RBP14.52□□□□□ -0.09
TRAF3IP2-207ENST00000368761 DEKP35659 375 aaKnown RBP14.52□□□□□ -0.09
TRAF3IP2-207ENST00000368761 PTMSP20962 102 aa14.51□□□□□ -0.09
TRAF3IP2-207ENST00000368761 ANP32CO43423 234 aa14.51□□□□□ -0.09
TRAF3IP2-207ENST00000368761 AMER1Q5JTC6 1135 aaPredicted RBP14.5□□□□□ -0.09
TRAF3IP2-207ENST00000368761 PKNOX2Q96KN3 472 aa14.49□□□□□ -0.09
TRAF3IP2-207ENST00000368761 PPM1GO15355 546 aaPredicted RBP14.46□□□□□ -0.09
TRAF3IP2-207ENST00000368761 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.46□□□□□ -0.09
TRAF3IP2-207ENST00000368761 VSIG10Q8N0Z9 540 aa14.45□□□□□ -0.1
TRAF3IP2-207ENST00000368761 UPF2Q9HAU5 1272 aaKnown RBP14.42□□□□□ -0.1
TRAF3IP2-207ENST00000368761 ARXQ96QS3 562 aa14.42□□□□□ -0.1
TRAF3IP2-207ENST00000368761 DDRGK1Q96HY6 314 aa14.4□□□□□ -0.1
TRAF3IP2-207ENST00000368761 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
TRAF3IP2-207ENST00000368761 CNGB1Q14028 1251 aaPredicted RBP14.4□□□□□ -0.1
TRAF3IP2-207ENST00000368761 TNNT3P45378 269 aaPredicted RBP14.38□□□□□ -0.11
TRAF3IP2-207ENST00000368761 UBTFP17480 764 aaKnown RBP14.37□□□□□ -0.11
TRAF3IP2-207ENST00000368761 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
TRAF3IP2-207ENST00000368761 RSPH6AQ9H0K4 717 aa14.35□□□□□ -0.11
TRAF3IP2-207ENST00000368761 NACADO15069 1562 aa14.35□□□□□ -0.11
TRAF3IP2-207ENST00000368761 A0A0U1RQG5 324 aaPredicted RBP14.34□□□□□ -0.11
TRAF3IP2-207ENST00000368761 HSP90AA2PQ14568 343 aaPredicted RBP14.32□□□□□ -0.12
TRAF3IP2-207ENST00000368761 CALRP27797 417 aaKnown RBP14.31□□□□□ -0.12
TRAF3IP2-207ENST00000368761 CCDC180Q9P1Z9 1646 aa14.31□□□□□ -0.12
TRAF3IP2-207ENST00000368761 DNTTIP2Q5QJE6 756 aaKnown RBP14.3□□□□□ -0.12
TRAF3IP2-207ENST00000368761 NOP58Q9Y2X3 529 aaKnown RBP14.3□□□□□ -0.12
TRAF3IP2-207ENST00000368761 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
TRAF3IP2-207ENST00000368761 CCDC136Q96JN2 1154 aa14.29□□□□□ -0.12
TRAF3IP2-207ENST00000368761 SCRIBQ14160 1630 aa14.27□□□□□ -0.13
TRAF3IP2-207ENST00000368761 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
TRAF3IP2-207ENST00000368761 L1TD1Q5T7N2 865 aaKnown RBP14.25□□□□□ -0.13
TRAF3IP2-207ENST00000368761 PNNQ9H307 717 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms