Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 BX640514.1-201ENST00000583223 1918 ntBASIC15.51■□□□□ 0.07
MKS1Q9NXB0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 KRT8P23-201ENST00000560090 1207 ntBASIC15.5■□□□□ 0.07
MKS1Q9NXB0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 AC084121.4-201ENST00000641598 221 ntBASIC15.5■□□□□ 0.07
MKS1Q9NXB0 AF228730.8-201ENST00000642140 221 ntBASIC15.5■□□□□ 0.07
MKS1Q9NXB0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.5■□□□□ 0.07
MKS1Q9NXB0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 AP000845.1-201ENST00000581677 2131 ntBASIC15.49■□□□□ 0.07
MKS1Q9NXB0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 AC007967.2-201ENST00000432613 625 ntBASIC15.49■□□□□ 0.07
MKS1Q9NXB0 SPCS2P4-201ENST00000436160 681 ntBASIC15.49■□□□□ 0.07
MKS1Q9NXB0 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 AC243562.1-201ENST00000560672 389 ntBASIC15.49■□□□□ 0.07
MKS1Q9NXB0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MKS1Q9NXB0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 269.6 ms