Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC106028.4-201ENST00000614509 607 ntBASIC18.6■□□□□ 0.57
NEK1Q96PY6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEK1Q96PY6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NEK1Q96PY6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEK1Q96PY6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEK1Q96PY6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEK1Q96PY6 MIR770-201ENST00000390219 98 ntBASIC18.59■□□□□ 0.57
NEK1Q96PY6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 AC241585.1-201ENST00000433527 519 ntBASIC18.59■□□□□ 0.57
NEK1Q96PY6 IGHV3-42-201ENST00000520410 361 ntBASIC18.59■□□□□ 0.57
NEK1Q96PY6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEK1Q96PY6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.59■□□□□ 0.57
NEK1Q96PY6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEK1Q96PY6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEK1Q96PY6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NEK1Q96PY6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEK1Q96PY6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NEK1Q96PY6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
NEK1Q96PY6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NEK1Q96PY6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.58■□□□□ 0.57
NEK1Q96PY6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NEK1Q96PY6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NEK1Q96PY6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NEK1Q96PY6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NEK1Q96PY6 KRT8P44-201ENST00000441609 1350 ntBASIC18.58■□□□□ 0.57
NEK1Q96PY6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NEK1Q96PY6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.58■□□□□ 0.57
NEK1Q96PY6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.58■□□□□ 0.57
NEK1Q96PY6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NEK1Q96PY6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NEK1Q96PY6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NEK1Q96PY6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
NEK1Q96PY6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NEK1Q96PY6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 AC015922.1-201ENST00000421102 1152 ntBASIC18.58■□□□□ 0.56
NEK1Q96PY6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 AC055876.3-201ENST00000431496 288 ntBASIC18.58■□□□□ 0.56
NEK1Q96PY6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 ZNF890P-202ENST00000530367 1156 ntBASIC18.58■□□□□ 0.56
NEK1Q96PY6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 AC138649.4-201ENST00000612222 287 ntBASIC18.58■□□□□ 0.56
NEK1Q96PY6 AC093512.1-201ENST00000617969 520 ntBASIC18.58■□□□□ 0.56
NEK1Q96PY6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NEK1Q96PY6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.58■□□□□ 0.56
NEK1Q96PY6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms