Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 TSPY22P-201ENST00000427496 604 ntBASIC11.94□□□□□ -0.5
MRPL54Q6P161 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 AC011558.1-201ENST00000623459 338 ntBASIC11.94□□□□□ -0.5
MRPL54Q6P161 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 CR383656.2-201ENST00000548656 2254 ntBASIC11.94□□□□□ -0.5
MRPL54Q6P161 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 REXO1L1P-202ENST00000608646 1974 ntBASIC11.94□□□□□ -0.5
MRPL54Q6P161 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 ZBED1P1-201ENST00000502364 1930 ntBASIC11.94□□□□□ -0.5
MRPL54Q6P161 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 KRT17P2-201ENST00000300992 1314 ntBASIC11.93□□□□□ -0.5
MRPL54Q6P161 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 ARMC10P1-201ENST00000313754 855 ntBASIC11.93□□□□□ -0.5
MRPL54Q6P161 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 GCSHP5-201ENST00000443090 522 ntBASIC11.93□□□□□ -0.5
MRPL54Q6P161 AC112907.2-201ENST00000448639 330 ntBASIC11.93□□□□□ -0.5
MRPL54Q6P161 VENTXP7-201ENST00000475503 772 ntBASIC11.93□□□□□ -0.5
MRPL54Q6P161 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms