Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MSR1P21757 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 HYMAI-201ENST00000635591 3347 ntBASIC13.93□□□□□ -0.18
MSR1P21757 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
MSR1P21757 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MSR1P21757 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
MSR1P21757 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.93□□□□□ -0.18
MSR1P21757 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.93□□□□□ -0.18
MSR1P21757 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.93□□□□□ -0.18
MSR1P21757 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.93□□□□□ -0.18
MSR1P21757 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.93□□□□□ -0.18
MSR1P21757 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.93□□□□□ -0.18
MSR1P21757 AC004449.1-201ENST00000564240 433 ntBASIC13.93□□□□□ -0.18
MSR1P21757 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.93□□□□□ -0.18
MSR1P21757 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.93□□□□□ -0.18
MSR1P21757 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 MIR6069-201ENST00000620069 79 ntBASIC13.93□□□□□ -0.18
MSR1P21757 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 AL161772.1-201ENST00000610494 4412 ntBASIC13.93□□□□□ -0.18
MSR1P21757 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
MSR1P21757 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
MSR1P21757 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.93□□□□□ -0.18
MSR1P21757 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 PPT1-215ENST00000641471 2368 ntBASIC13.93□□□□□ -0.18
MSR1P21757 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MSR1P21757 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 AL607033.1-201ENST00000623900 1599 ntBASIC13.92□□□□□ -0.18
MSR1P21757 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.92□□□□□ -0.18
MSR1P21757 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
MSR1P21757 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
MSR1P21757 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
MSR1P21757 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 AL139400.1-201ENST00000366220 510 ntBASIC13.92□□□□□ -0.18
MSR1P21757 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 HIST3H2BA-201ENST00000436555 524 ntBASIC13.92□□□□□ -0.18
MSR1P21757 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.92□□□□□ -0.18
MSR1P21757 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.92□□□□□ -0.18
MSR1P21757 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.92□□□□□ -0.18
MSR1P21757 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.92□□□□□ -0.18
MSR1P21757 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 Z92544.3-201ENST00000624747 417 ntBASIC13.92□□□□□ -0.18
MSR1P21757 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.92□□□□□ -0.18
MSR1P21757 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MSR1P21757 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MSR1P21757 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
MSR1P21757 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MSR1P21757 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MSR1P21757 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MSR1P21757 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MSR1P21757 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MSR1P21757 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MSR1P21757 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MSR1P21757 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms