Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CD58P19256 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.89■□□□□ 0.29
CD58P19256 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.89■□□□□ 0.29
CD58P19256 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CD58P19256 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CD58P19256 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.89■□□□□ 0.29
CD58P19256 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.89■□□□□ 0.29
CD58P19256 FAM8A3P-201ENST00000427218 844 ntBASIC16.89■□□□□ 0.29
CD58P19256 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.89■□□□□ 0.29
CD58P19256 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.89■□□□□ 0.29
CD58P19256 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.89■□□□□ 0.29
CD58P19256 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.89■□□□□ 0.29
CD58P19256 AC135586.1-201ENST00000539323 574 ntBASIC16.89■□□□□ 0.29
CD58P19256 AC004461.2-201ENST00000629517 803 ntBASIC16.89■□□□□ 0.29
CD58P19256 AC004840.1-201ENST00000636359 365 ntBASIC16.89■□□□□ 0.29
CD58P19256 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CD58P19256 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.89■□□□□ 0.29
CD58P19256 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
CD58P19256 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.89■□□□□ 0.29
CD58P19256 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.89■□□□□ 0.29
CD58P19256 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD58P19256 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CD58P19256 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.88■□□□□ 0.29
CD58P19256 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.88■□□□□ 0.29
CD58P19256 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.88■□□□□ 0.29
CD58P19256 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.88■□□□□ 0.29
CD58P19256 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.88■□□□□ 0.29
CD58P19256 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.88■□□□□ 0.29
CD58P19256 SPDYE18-201ENST00000510091 1050 ntBASIC16.88■□□□□ 0.29
CD58P19256 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.88■□□□□ 0.29
CD58P19256 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.88■□□□□ 0.29
CD58P19256 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.88■□□□□ 0.29
CD58P19256 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.88■□□□□ 0.29
CD58P19256 AC011467.4-201ENST00000594891 528 ntBASIC16.88■□□□□ 0.29
CD58P19256 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.88■□□□□ 0.29
CD58P19256 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CD58P19256 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CD58P19256 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.88■□□□□ 0.29
CD58P19256 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD58P19256 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CD58P19256 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.87■□□□□ 0.29
CD58P19256 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 AP002414.2-201ENST00000591780 3365 ntBASIC16.87■□□□□ 0.29
CD58P19256 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD58P19256 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.87■□□□□ 0.29
CD58P19256 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.87■□□□□ 0.29
CD58P19256 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CD58P19256 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.87■□□□□ 0.29
CD58P19256 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms