Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.02□□□□□ -0.49
TCRAP04437 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TCRAP04437 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 RPS2P28-201ENST00000314255 741 ntBASIC12.02□□□□□ -0.49
TCRAP04437 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRAP04437 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.02□□□□□ -0.49
TCRAP04437 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRAP04437 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TCRAP04437 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.02□□□□□ -0.49
TCRAP04437 AC012640.2-201ENST00000561606 901 ntBASIC12.02□□□□□ -0.49
TCRAP04437 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.02□□□□□ -0.49
TCRAP04437 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.02□□□□□ -0.49
TCRAP04437 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.02□□□□□ -0.49
TCRAP04437 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRAP04437 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRAP04437 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRAP04437 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TCRAP04437 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.02□□□□□ -0.49
TCRAP04437 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TCRAP04437 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRAP04437 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.01□□□□□ -0.49
TCRAP04437 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
TCRAP04437 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.01□□□□□ -0.49
TCRAP04437 HCG4P8-203ENST00000443049 980 ntBASIC12.01□□□□□ -0.49
TCRAP04437 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.01□□□□□ -0.49
TCRAP04437 AC108751.1-201ENST00000490852 363 ntBASIC12.01□□□□□ -0.49
TCRAP04437 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TCRAP04437 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 AC024267.1-201ENST00000582320 895 ntBASIC12.01□□□□□ -0.49
TCRAP04437 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.01□□□□□ -0.49
TCRAP04437 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TCRAP04437 TP73-AS1-207ENST00000624167 988 ntBASIC12.01□□□□□ -0.49
TCRAP04437 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 AC117500.6-201ENST00000624871 588 ntBASIC12.01□□□□□ -0.49
TCRAP04437 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TCRAP04437 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TCRAP04437 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.01□□□□□ -0.49
TCRAP04437 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.01□□□□□ -0.49
TCRAP04437 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.01□□□□□ -0.49
TCRAP04437 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.01□□□□□ -0.49
TCRAP04437 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.01□□□□□ -0.49
TCRAP04437 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRAP04437 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TCRAP04437 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms