Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 AC015656.1-201ENST00000624209 3578 ntBASIC11.6□□□□□ -0.55
NACAE9PAV3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
NACAE9PAV3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.6□□□□□ -0.55
NACAE9PAV3 FAM185BP-201ENST00000443595 716 ntBASIC11.6□□□□□ -0.55
NACAE9PAV3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NACAE9PAV3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NACAE9PAV3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
NACAE9PAV3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.6□□□□□ -0.55
NACAE9PAV3 AP002472.1-201ENST00000577490 586 ntBASIC11.6□□□□□ -0.55
NACAE9PAV3 AC005498.2-205ENST00000593218 784 ntBASIC11.6□□□□□ -0.55
NACAE9PAV3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 AJ011932.1-201ENST00000621707 465 ntBASIC11.6□□□□□ -0.55
NACAE9PAV3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.6□□□□□ -0.55
NACAE9PAV3 AC126755.1-201ENST00000525846 6405 ntBASIC11.6□□□□□ -0.55
NACAE9PAV3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.6□□□□□ -0.55
NACAE9PAV3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
NACAE9PAV3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.6□□□□□ -0.55
NACAE9PAV3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.6□□□□□ -0.55
NACAE9PAV3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.6□□□□□ -0.55
NACAE9PAV3 AC009090.5-201ENST00000624886 2285 ntBASIC11.6□□□□□ -0.55
NACAE9PAV3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
NACAE9PAV3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.6□□□□□ -0.55
NACAE9PAV3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NACAE9PAV3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.6□□□□□ -0.55
NACAE9PAV3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
NACAE9PAV3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
NACAE9PAV3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC11.59□□□□□ -0.55
NACAE9PAV3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 AKAP8P1-201ENST00000434743 1349 ntBASIC11.59□□□□□ -0.55
NACAE9PAV3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.59□□□□□ -0.55
NACAE9PAV3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
NACAE9PAV3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
NACAE9PAV3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.59□□□□□ -0.55
NACAE9PAV3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.59□□□□□ -0.55
NACAE9PAV3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.59□□□□□ -0.55
NACAE9PAV3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.59□□□□□ -0.55
NACAE9PAV3 AC105339.1-204ENST00000636249 355 ntBASIC11.59□□□□□ -0.55
NACAE9PAV3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.59□□□□□ -0.55
NACAE9PAV3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.59□□□□□ -0.55
NACAE9PAV3 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
NACAE9PAV3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.59□□□□□ -0.55
NACAE9PAV3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.59□□□□□ -0.55
NACAE9PAV3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NACAE9PAV3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms