RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
PTCHD1-201ENST00000379361 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
PTCHD1-201ENST00000379361 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
PTCHD1-201ENST00000379361 APLP2Q06481 763 aa17.61■□□□□ 0.41
PTCHD1-201ENST00000379361 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
PTCHD1-201ENST00000379361 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
PTCHD1-201ENST00000379361 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
PTCHD1-201ENST00000379361 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
PTCHD1-201ENST00000379361 SHROOM4Q9ULL8 1493 aa16.91■□□□□ 0.3
PTCHD1-201ENST00000379361 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
PTCHD1-201ENST00000379361 NEFLP07196 543 aa16.9■□□□□ 0.3
PTCHD1-201ENST00000379361 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
PTCHD1-201ENST00000379361 YTHDC1Q96MU7 727 aaKnown RBP16.83■□□□□ 0.28
PTCHD1-201ENST00000379361 ATP1B4Q9UN42 357 aaPredicted RBP16.8■□□□□ 0.28
PTCHD1-201ENST00000379361 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
PTCHD1-201ENST00000379361 MYT1Q01538 1121 aa16.7■□□□□ 0.26
PTCHD1-201ENST00000379361 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
PTCHD1-201ENST00000379361 NISCHQ9Y2I1 1504 aa16.63■□□□□ 0.25
PTCHD1-201ENST00000379361 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
PTCHD1-201ENST00000379361 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
PTCHD1-201ENST00000379361 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
PTCHD1-201ENST00000379361 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
PTCHD1-201ENST00000379361 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
PTCHD1-201ENST00000379361 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
PTCHD1-201ENST00000379361 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
PTCHD1-201ENST00000379361 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
PTCHD1-201ENST00000379361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
PTCHD1-201ENST00000379361 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
PTCHD1-201ENST00000379361 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
PTCHD1-201ENST00000379361 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
PTCHD1-201ENST00000379361 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
PTCHD1-201ENST00000379361 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
PTCHD1-201ENST00000379361 ITGAEP38570 1179 aa15.88■□□□□ 0.13
PTCHD1-201ENST00000379361 SLC24A1O60721 1099 aa15.83■□□□□ 0.12
PTCHD1-201ENST00000379361 CNGB1Q14028 1251 aaPredicted RBP15.83■□□□□ 0.12
PTCHD1-201ENST00000379361 NEFMP07197 916 aa15.83■□□□□ 0.12
PTCHD1-201ENST00000379361 CANXP27824 592 aaKnown RBP15.71■□□□□ 0.1
PTCHD1-201ENST00000379361 BCANQ96GW7 911 aa15.7■□□□□ 0.1
PTCHD1-201ENST00000379361 ANP32BQ92688 251 aaKnown RBP15.67■□□□□ 0.1
PTCHD1-201ENST00000379361 PPARGC1BQ86YN6 1023 aaKnown RBP15.61■□□□□ 0.09
PTCHD1-201ENST00000379361 TRIM26Q12899 539 aaPredicted RBP15.61■□□□□ 0.09
PTCHD1-201ENST00000379361 BCL11AQ9H165 835 aa15.55■□□□□ 0.08
PTCHD1-201ENST00000379361 CDK11BP21127 795 aaKnown RBP15.55■□□□□ 0.08
PTCHD1-201ENST00000379361 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
PTCHD1-201ENST00000379361 TRIM52Q96A61 297 aa15.53■□□□□ 0.08
PTCHD1-201ENST00000379361 ESF1Q9H501 851 aaKnown RBP15.52■□□□□ 0.08
PTCHD1-201ENST00000379361 HSP90AA1P07900 732 aaKnown RBP15.52■□□□□ 0.07
PTCHD1-201ENST00000379361 FAM50AQ14320 339 aaKnown RBP15.48■□□□□ 0.07
PTCHD1-201ENST00000379361 ANP32CO43423 234 aa15.46■□□□□ 0.06
PTCHD1-201ENST00000379361 ZNF326Q5BKZ1 582 aaKnown RBP15.4■□□□□ 0.06
PTCHD1-201ENST00000379361 HRCP23327 699 aa15.39■□□□□ 0.05
PTCHD1-201ENST00000379361 ANP32AP39687 249 aaKnown RBP15.37■□□□□ 0.05
PTCHD1-201ENST00000379361 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.05
PTCHD1-201ENST00000379361 UPF2Q9HAU5 1272 aaKnown RBP15.32■□□□□ 0.04
PTCHD1-201ENST00000379361 NEUROD1Q13562 356 aa15.3■□□□□ 0.04
PTCHD1-201ENST00000379361 KAT6BQ8WYB5 2073 aa15.3■□□□□ 0.04
PTCHD1-201ENST00000379361 FBLN2P98095 1184 aa15.27■□□□□ 0.03
PTCHD1-201ENST00000379361 GLIPR1L2Q4G1C9 344 aa15.25■□□□□ 0.03
PTCHD1-201ENST00000379361 DIEXFQ68CQ4 756 aaKnown RBP15.25■□□□□ 0.03
PTCHD1-201ENST00000379361 NPM2Q86SE8 214 aaKnown RBP15.23■□□□□ 0.03
PTCHD1-201ENST00000379361 A0A0G2JS52 829 aa15.17■□□□□ 0.02
PTCHD1-201ENST00000379361 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
PTCHD1-201ENST00000379361 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
PTCHD1-201ENST00000379361 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
PTCHD1-201ENST00000379361 EIF5BO60841 1220 aaKnown RBP15.11■□□□□ 0.01
PTCHD1-201ENST00000379361 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.09■□□□□ 0.01
PTCHD1-201ENST00000379361 CHGAP10645 457 aaKnown RBP15.02■□□□□ -0
PTCHD1-201ENST00000379361 LOC105371045A0A1W2PR82 267 aa15.01□□□□□ -0.01
PTCHD1-201ENST00000379361 NPM1P06748 294 aaKnown RBP eCLIP15□□□□□ -0.01
PTCHD1-201ENST00000379361 ZNF777Q9ULD5 760 aaPredicted RBP14.98□□□□□ -0.01
PTCHD1-201ENST00000379361 ZRSR1Q15695 479 aaKnown RBP14.98□□□□□ -0.01
PTCHD1-201ENST00000379361 NCLP19338 710 aaKnown RBP14.97□□□□□ -0.01
PTCHD1-201ENST00000379361 NPHP1O15259 732 aa14.96□□□□□ -0.02
PTCHD1-201ENST00000379361 C14orf37Q86TY3 774 aa14.95□□□□□ -0.02
PTCHD1-201ENST00000379361 TNNT2P45379 298 aaPredicted RBP14.94□□□□□ -0.02
PTCHD1-201ENST00000379361 TULP1O00294 542 aaPredicted RBP14.93□□□□□ -0.02
PTCHD1-201ENST00000379361 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
PTCHD1-201ENST00000379361 GOLGA6L22H0YM25 854 aa14.91□□□□□ -0.02
PTCHD1-201ENST00000379361 ANP32EQ9BTT0 268 aa14.9□□□□□ -0.02
PTCHD1-201ENST00000379361 TRIM44Q96DX7 344 aaPredicted RBP14.87□□□□□ -0.03
PTCHD1-201ENST00000379361 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
PTCHD1-201ENST00000379361 WDR43Q15061 677 aaKnown RBP eCLIP14.87□□□□□ -0.03
PTCHD1-201ENST00000379361 CASC1Q6TDU7 716 aa14.86□□□□□ -0.03
PTCHD1-201ENST00000379361 ARID3CA6NKF2 412 aa14.84□□□□□ -0.03
PTCHD1-201ENST00000379361 BECN1Q14457 450 aa14.84□□□□□ -0.03
PTCHD1-201ENST00000379361 GOLGA6L6A8MZA4 724 aa14.82□□□□□ -0.04
PTCHD1-201ENST00000379361 TONSLQ96HA7 1378 aa14.8□□□□□ -0.04
PTCHD1-201ENST00000379361 ARXQ96QS3 562 aa14.8□□□□□ -0.04
PTCHD1-201ENST00000379361 ZBTB7CA1YPR0 619 aa14.79□□□□□ -0.04
PTCHD1-201ENST00000379361 NRDCO43847 1150 aa14.79□□□□□ -0.04
PTCHD1-201ENST00000379361 PTMAP06454 111 aaKnown RBP14.78□□□□□ -0.04
PTCHD1-201ENST00000379361 CCDC136Q96JN2 1154 aa14.78□□□□□ -0.04
PTCHD1-201ENST00000379361 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
PTCHD1-201ENST00000379361 GOLGA2Q08379 1002 aa14.75□□□□□ -0.05
PTCHD1-201ENST00000379361 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
PTCHD1-201ENST00000379361 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
PTCHD1-201ENST00000379361 PPP1R15AO75807 674 aaPredicted RBP14.74□□□□□ -0.05
PTCHD1-201ENST00000379361 CLSTN1O94985 981 aa14.74□□□□□ -0.05
PTCHD1-201ENST00000379361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
PTCHD1-201ENST00000379361 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms