RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
PTCHD1-201ENST00000379361 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
PTCHD1-201ENST00000379361 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
PTCHD1-201ENST00000379361 APLP2Q06481 763 aa17.61■□□□□ 0.41
PTCHD1-201ENST00000379361 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
PTCHD1-201ENST00000379361 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
PTCHD1-201ENST00000379361 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
PTCHD1-201ENST00000379361 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
PTCHD1-201ENST00000379361 SHROOM4Q9ULL8 1493 aa16.91■□□□□ 0.3
PTCHD1-201ENST00000379361 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
PTCHD1-201ENST00000379361 NEFLP07196 543 aa16.9■□□□□ 0.3
PTCHD1-201ENST00000379361 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
PTCHD1-201ENST00000379361 YTHDC1Q96MU7 727 aaKnown RBP16.83■□□□□ 0.28
PTCHD1-201ENST00000379361 ATP1B4Q9UN42 357 aaPredicted RBP16.8■□□□□ 0.28
PTCHD1-201ENST00000379361 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
PTCHD1-201ENST00000379361 MYT1Q01538 1121 aa16.7■□□□□ 0.26
PTCHD1-201ENST00000379361 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
PTCHD1-201ENST00000379361 NISCHQ9Y2I1 1504 aa16.63■□□□□ 0.25
PTCHD1-201ENST00000379361 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
PTCHD1-201ENST00000379361 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
PTCHD1-201ENST00000379361 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
PTCHD1-201ENST00000379361 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
PTCHD1-201ENST00000379361 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
PTCHD1-201ENST00000379361 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
PTCHD1-201ENST00000379361 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
PTCHD1-201ENST00000379361 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
PTCHD1-201ENST00000379361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
PTCHD1-201ENST00000379361 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
PTCHD1-201ENST00000379361 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
PTCHD1-201ENST00000379361 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
PTCHD1-201ENST00000379361 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
PTCHD1-201ENST00000379361 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
PTCHD1-201ENST00000379361 ITGAEP38570 1179 aa15.88■□□□□ 0.13
PTCHD1-201ENST00000379361 SLC24A1O60721 1099 aa15.83■□□□□ 0.12
PTCHD1-201ENST00000379361 CNGB1Q14028 1251 aaPredicted RBP15.83■□□□□ 0.12
PTCHD1-201ENST00000379361 NEFMP07197 916 aa15.83■□□□□ 0.12
PTCHD1-201ENST00000379361 CANXP27824 592 aaKnown RBP15.71■□□□□ 0.1
PTCHD1-201ENST00000379361 BCANQ96GW7 911 aa15.7■□□□□ 0.1
PTCHD1-201ENST00000379361 ANP32BQ92688 251 aaKnown RBP15.67■□□□□ 0.1
PTCHD1-201ENST00000379361 PPARGC1BQ86YN6 1023 aaKnown RBP15.61■□□□□ 0.09
PTCHD1-201ENST00000379361 TRIM26Q12899 539 aaPredicted RBP15.61■□□□□ 0.09
PTCHD1-201ENST00000379361 BCL11AQ9H165 835 aa15.55■□□□□ 0.08
PTCHD1-201ENST00000379361 CDK11BP21127 795 aaKnown RBP15.55■□□□□ 0.08
PTCHD1-201ENST00000379361 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
PTCHD1-201ENST00000379361 TRIM52Q96A61 297 aa15.53■□□□□ 0.08
PTCHD1-201ENST00000379361 ESF1Q9H501 851 aaKnown RBP15.52■□□□□ 0.08
PTCHD1-201ENST00000379361 HSP90AA1P07900 732 aaKnown RBP15.52■□□□□ 0.07
PTCHD1-201ENST00000379361 FAM50AQ14320 339 aaKnown RBP15.48■□□□□ 0.07
PTCHD1-201ENST00000379361 ANP32CO43423 234 aa15.46■□□□□ 0.06
PTCHD1-201ENST00000379361 ZNF326Q5BKZ1 582 aaKnown RBP15.4■□□□□ 0.06
PTCHD1-201ENST00000379361 HRCP23327 699 aa15.39■□□□□ 0.05
PTCHD1-201ENST00000379361 ANP32AP39687 249 aaKnown RBP15.37■□□□□ 0.05
PTCHD1-201ENST00000379361 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.05
PTCHD1-201ENST00000379361 UPF2Q9HAU5 1272 aaKnown RBP15.32■□□□□ 0.04
PTCHD1-201ENST00000379361 NEUROD1Q13562 356 aa15.3■□□□□ 0.04
PTCHD1-201ENST00000379361 KAT6BQ8WYB5 2073 aa15.3■□□□□ 0.04
PTCHD1-201ENST00000379361 FBLN2P98095 1184 aa15.27■□□□□ 0.03
PTCHD1-201ENST00000379361 GLIPR1L2Q4G1C9 344 aa15.25■□□□□ 0.03
PTCHD1-201ENST00000379361 DIEXFQ68CQ4 756 aaKnown RBP15.25■□□□□ 0.03
PTCHD1-201ENST00000379361 NPM2Q86SE8 214 aaKnown RBP15.23■□□□□ 0.03
PTCHD1-201ENST00000379361 A0A0G2JS52 829 aa15.17■□□□□ 0.02
PTCHD1-201ENST00000379361 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
PTCHD1-201ENST00000379361 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
PTCHD1-201ENST00000379361 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
PTCHD1-201ENST00000379361 EIF5BO60841 1220 aaKnown RBP15.11■□□□□ 0.01
PTCHD1-201ENST00000379361 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.09■□□□□ 0.01
PTCHD1-201ENST00000379361 CHGAP10645 457 aaKnown RBP15.02■□□□□ -0
PTCHD1-201ENST00000379361 LOC105371045A0A1W2PR82 267 aa15.01□□□□□ -0.01
PTCHD1-201ENST00000379361 NPM1P06748 294 aaKnown RBP eCLIP15□□□□□ -0.01
PTCHD1-201ENST00000379361 ZNF777Q9ULD5 760 aaPredicted RBP14.98□□□□□ -0.01
PTCHD1-201ENST00000379361 ZRSR1Q15695 479 aaKnown RBP14.98□□□□□ -0.01
PTCHD1-201ENST00000379361 NCLP19338 710 aaKnown RBP14.97□□□□□ -0.01
PTCHD1-201ENST00000379361 NPHP1O15259 732 aa14.96□□□□□ -0.02
PTCHD1-201ENST00000379361 C14orf37Q86TY3 774 aa14.95□□□□□ -0.02
PTCHD1-201ENST00000379361 TNNT2P45379 298 aaPredicted RBP14.94□□□□□ -0.02
PTCHD1-201ENST00000379361 TULP1O00294 542 aaPredicted RBP14.93□□□□□ -0.02
PTCHD1-201ENST00000379361 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
PTCHD1-201ENST00000379361 GOLGA6L22H0YM25 854 aa14.91□□□□□ -0.02
PTCHD1-201ENST00000379361 ANP32EQ9BTT0 268 aa14.9□□□□□ -0.02
PTCHD1-201ENST00000379361 TRIM44Q96DX7 344 aaPredicted RBP14.87□□□□□ -0.03
PTCHD1-201ENST00000379361 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
PTCHD1-201ENST00000379361 WDR43Q15061 677 aaKnown RBP eCLIP14.87□□□□□ -0.03
PTCHD1-201ENST00000379361 CASC1Q6TDU7 716 aa14.86□□□□□ -0.03
PTCHD1-201ENST00000379361 ARID3CA6NKF2 412 aa14.84□□□□□ -0.03
PTCHD1-201ENST00000379361 BECN1Q14457 450 aa14.84□□□□□ -0.03
PTCHD1-201ENST00000379361 GOLGA6L6A8MZA4 724 aa14.82□□□□□ -0.04
PTCHD1-201ENST00000379361 TONSLQ96HA7 1378 aa14.8□□□□□ -0.04
PTCHD1-201ENST00000379361 ARXQ96QS3 562 aa14.8□□□□□ -0.04
PTCHD1-201ENST00000379361 ZBTB7CA1YPR0 619 aa14.79□□□□□ -0.04
PTCHD1-201ENST00000379361 NRDCO43847 1150 aa14.79□□□□□ -0.04
PTCHD1-201ENST00000379361 PTMAP06454 111 aaKnown RBP14.78□□□□□ -0.04
PTCHD1-201ENST00000379361 CCDC136Q96JN2 1154 aa14.78□□□□□ -0.04
PTCHD1-201ENST00000379361 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
PTCHD1-201ENST00000379361 GOLGA2Q08379 1002 aa14.75□□□□□ -0.05
PTCHD1-201ENST00000379361 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
PTCHD1-201ENST00000379361 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
PTCHD1-201ENST00000379361 PPP1R15AO75807 674 aaPredicted RBP14.74□□□□□ -0.05
PTCHD1-201ENST00000379361 CLSTN1O94985 981 aa14.74□□□□□ -0.05
PTCHD1-201ENST00000379361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
PTCHD1-201ENST00000379361 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms