Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC138969.3-201ENST00000546612 1459 ntBASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC138932.2-201ENST00000548268 1459 ntBASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC126755.4-201ENST00000549796 1459 ntBASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 MIR770-201ENST00000390219 98 ntBASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 AL133267.1-201ENST00000398220 340 ntBASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC196A0A1B0GTZ2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC136621.1-201ENST00000624017 2304 ntBASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 INGX-202ENST00000489074 768 ntBASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC135586.1-201ENST00000539323 574 ntBASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC008738.7-201ENST00000609744 511 ntBASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC196A0A1B0GTZ2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC196A0A1B0GTZ2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC196A0A1B0GTZ2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC196A0A1B0GTZ2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC196A0A1B0GTZ2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC196A0A1B0GTZ2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC196A0A1B0GTZ2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC196A0A1B0GTZ2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC196A0A1B0GTZ2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC196A0A1B0GTZ2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC067930.6-201ENST00000623257 4947 ntBASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms