Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 AC020658.6-201ENST00000623564 1870 ntBASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 AC138035.3-201ENST00000622706 2791 ntBASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 AC069335.1-201ENST00000489972 472 ntBASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 HLA-J-203ENST00000494367 1087 ntBASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 PRYP6-201ENST00000514804 343 ntBASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 LINC01225-203ENST00000563550 1244 ntBASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PCGF3Q3KNV8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 SNX18-202ENST00000343017 3140 ntBASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 AP000842.3-202ENST00000569238 1080 ntBASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 LINC00628-201ENST00000628516 1289 ntBASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.03□□□□□ -0.16
PCGF3Q3KNV8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms