Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.34■□□□□ 0.05
AP1S2P56377 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.34■□□□□ 0.05
AP1S2P56377 AC027369.6-201ENST00000525520 931 ntBASIC15.34■□□□□ 0.05
AP1S2P56377 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.34■□□□□ 0.05
AP1S2P56377 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.34■□□□□ 0.05
AP1S2P56377 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.34■□□□□ 0.05
AP1S2P56377 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
AP1S2P56377 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
AP1S2P56377 AC087499.5-201ENST00000452760 1342 ntBASIC15.34■□□□□ 0.05
AP1S2P56377 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
AP1S2P56377 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
AP1S2P56377 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.34■□□□□ 0.05
AP1S2P56377 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.34■□□□□ 0.05
AP1S2P56377 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
AP1S2P56377 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
AP1S2P56377 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S2P56377 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP1S2P56377 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
AP1S2P56377 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP1S2P56377 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP1S2P56377 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.33■□□□□ 0.05
AP1S2P56377 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP1S2P56377 AC067930.6-201ENST00000623257 4947 ntBASIC15.33■□□□□ 0.05
AP1S2P56377 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP1S2P56377 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.33■□□□□ 0.05
AP1S2P56377 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.33■□□□□ 0.04
AP1S2P56377 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
AP1S2P56377 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.33■□□□□ 0.04
AP1S2P56377 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.33■□□□□ 0.04
AP1S2P56377 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.33■□□□□ 0.04
AP1S2P56377 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 SDHAP3-202ENST00000515467 728 ntBASIC15.33■□□□□ 0.04
AP1S2P56377 ZNF890P-202ENST00000530367 1156 ntBASIC15.33■□□□□ 0.04
AP1S2P56377 AL512361.1-201ENST00000554200 418 ntBASIC15.33■□□□□ 0.04
AP1S2P56377 AC010336.2-201ENST00000564226 506 ntBASIC15.33■□□□□ 0.04
AP1S2P56377 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.33■□□□□ 0.04
AP1S2P56377 AC074044.1-201ENST00000609673 707 ntBASIC15.33■□□□□ 0.04
AP1S2P56377 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.33■□□□□ 0.04
AP1S2P56377 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
AP1S2P56377 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.33■□□□□ 0.04
AP1S2P56377 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.33■□□□□ 0.04
AP1S2P56377 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 AC009090.5-201ENST00000624886 2285 ntBASIC15.33■□□□□ 0.04
AP1S2P56377 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP1S2P56377 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.33■□□□□ 0.04
AP1S2P56377 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
AP1S2P56377 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.33■□□□□ 0.04
AP1S2P56377 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
AP1S2P56377 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.33■□□□□ 0.04
AP1S2P56377 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.33■□□□□ 0.04
AP1S2P56377 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.33■□□□□ 0.04
AP1S2P56377 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.33■□□□□ 0.04
AP1S2P56377 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S2P56377 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
AP1S2P56377 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.33■□□□□ 0.04
AP1S2P56377 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
AP1S2P56377 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.32■□□□□ 0.04
AP1S2P56377 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.32■□□□□ 0.04
AP1S2P56377 RPL5P21-201ENST00000404620 815 ntBASIC15.32■□□□□ 0.04
AP1S2P56377 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms