Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 GHSR-202ENST00000427970 912 ntBASIC14.36□□□□□ -0.11
HMGA2P52926 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGA2P52926 ADH5P3-201ENST00000433842 1137 ntBASIC14.36□□□□□ -0.11
HMGA2P52926 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGA2P52926 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGA2P52926 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HMGA2P52926 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGA2P52926 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGA2P52926 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGA2P52926 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGA2P52926 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGA2P52926 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.36□□□□□ -0.11
HMGA2P52926 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGA2P52926 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGA2P52926 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGA2P52926 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGA2P52926 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 CICP11-201ENST00000434745 2827 ntBASIC14.36□□□□□ -0.11
HMGA2P52926 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGA2P52926 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGA2P52926 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGA2P52926 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 AP3S2-216ENST00000617003 1561 ntBASIC14.35□□□□□ -0.11
HMGA2P52926 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.35□□□□□ -0.11
HMGA2P52926 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGA2P52926 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGA2P52926 FO393414.2-201ENST00000405153 598 ntBASIC14.35□□□□□ -0.11
HMGA2P52926 SPCS2P4-201ENST00000436160 681 ntBASIC14.35□□□□□ -0.11
HMGA2P52926 RPL13AP23-201ENST00000480739 586 ntBASIC14.35□□□□□ -0.11
HMGA2P52926 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.35□□□□□ -0.11
HMGA2P52926 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGA2P52926 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.35□□□□□ -0.11
HMGA2P52926 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.35□□□□□ -0.11
HMGA2P52926 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
HMGA2P52926 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGA2P52926 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGA2P52926 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HMGA2P52926 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HMGA2P52926 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HMGA2P52926 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.34□□□□□ -0.11
HMGA2P52926 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 AL450487.1-201ENST00000426799 995 ntBASIC14.34□□□□□ -0.11
HMGA2P52926 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms