Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 CEND1P1-201ENST00000451006 455 ntBASIC16.8■□□□□ 0.28
FAM228BP0C875 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.8■□□□□ 0.28
FAM228BP0C875 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM228BP0C875 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.8■□□□□ 0.28
FAM228BP0C875 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.8■□□□□ 0.28
FAM228BP0C875 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
FAM228BP0C875 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 AL671883.3-201ENST00000603274 991 ntBASIC16.8■□□□□ 0.28
FAM228BP0C875 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM228BP0C875 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.8■□□□□ 0.28
FAM228BP0C875 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FAM228BP0C875 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM228BP0C875 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM228BP0C875 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FAM228BP0C875 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM228BP0C875 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM228BP0C875 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
FAM228BP0C875 AC023908.3-201ENST00000564211 3047 ntBASIC16.79■□□□□ 0.28
FAM228BP0C875 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM228BP0C875 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 AL022342.1-201ENST00000400363 863 ntBASIC16.79■□□□□ 0.28
FAM228BP0C875 AC005237.2-201ENST00000434368 219 ntBASIC16.79■□□□□ 0.28
FAM228BP0C875 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.79■□□□□ 0.28
FAM228BP0C875 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM228BP0C875 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM228BP0C875 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM228BP0C875 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM228BP0C875 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
FAM228BP0C875 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.78■□□□□ 0.28
FAM228BP0C875 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM228BP0C875 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM228BP0C875 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FAM228BP0C875 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FAM228BP0C875 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
FAM228BP0C875 AL353705.2-201ENST00000428243 662 ntBASIC16.78■□□□□ 0.28
FAM228BP0C875 GPS2P2-201ENST00000430745 888 ntBASIC16.78■□□□□ 0.28
FAM228BP0C875 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM228BP0C875 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM228BP0C875 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM228BP0C875 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.78■□□□□ 0.28
FAM228BP0C875 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.78■□□□□ 0.28
FAM228BP0C875 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM228BP0C875 AC018529.1-201ENST00000613063 361 ntBASIC16.78■□□□□ 0.28
FAM228BP0C875 AL513210.1-201ENST00000629608 234 ntBASIC16.78■□□□□ 0.28
FAM228BP0C875 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM228BP0C875 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
FAM228BP0C875 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FAM228BP0C875 AL009178.2-201ENST00000597278 2719 ntBASIC16.78■□□□□ 0.28
FAM228BP0C875 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM228BP0C875 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FAM228BP0C875 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM228BP0C875 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FAM228BP0C875 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms