Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM5Q9Y4Y9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM5Q9Y4Y9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LSM5Q9Y4Y9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.14■□□□□ 0.66
LSM5Q9Y4Y9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LSM5Q9Y4Y9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
LSM5Q9Y4Y9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
LSM5Q9Y4Y9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM5Q9Y4Y9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM5Q9Y4Y9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.14■□□□□ 0.65
LSM5Q9Y4Y9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.14■□□□□ 0.65
LSM5Q9Y4Y9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.14■□□□□ 0.65
LSM5Q9Y4Y9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LSM5Q9Y4Y9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM5Q9Y4Y9 AL117328.2-201ENST00000624617 1940 ntBASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM5Q9Y4Y9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LSM5Q9Y4Y9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LSM5Q9Y4Y9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.12■□□□□ 0.65
LSM5Q9Y4Y9 AL359258.2-201ENST00000564063 1566 ntBASIC19.12■□□□□ 0.65
LSM5Q9Y4Y9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM5Q9Y4Y9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LSM5Q9Y4Y9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM5Q9Y4Y9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM5Q9Y4Y9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM5Q9Y4Y9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM5Q9Y4Y9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.11■□□□□ 0.65
LSM5Q9Y4Y9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LSM5Q9Y4Y9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM5Q9Y4Y9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.1■□□□□ 0.65
LSM5Q9Y4Y9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LSM5Q9Y4Y9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.1■□□□□ 0.65
LSM5Q9Y4Y9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM5Q9Y4Y9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM5Q9Y4Y9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.1■□□□□ 0.65
LSM5Q9Y4Y9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LSM5Q9Y4Y9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LSM5Q9Y4Y9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM5Q9Y4Y9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM5Q9Y4Y9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM5Q9Y4Y9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM5Q9Y4Y9 MIR219A2-201ENST00000608502 1504 ntBASIC19.09■□□□□ 0.65
LSM5Q9Y4Y9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LSM5Q9Y4Y9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.08■□□□□ 0.65
LSM5Q9Y4Y9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM5Q9Y4Y9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.08■□□□□ 0.64
LSM5Q9Y4Y9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM5Q9Y4Y9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LSM5Q9Y4Y9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM5Q9Y4Y9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.08■□□□□ 0.64
LSM5Q9Y4Y9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM5Q9Y4Y9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM5Q9Y4Y9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
LSM5Q9Y4Y9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM5Q9Y4Y9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM5Q9Y4Y9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms