Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 AC021242.3-201ENST00000607598 1377 ntBASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 DUSP8P4-201ENST00000399538 1761 ntBASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCP1Q9H5V8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCP1Q9H5V8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CDCP1Q9H5V8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDCP1Q9H5V8 AL356441.2-201ENST00000443009 864 ntBASIC21.7■■□□□ 1.06
CDCP1Q9H5V8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDCP1Q9H5V8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.7■■□□□ 1.06
CDCP1Q9H5V8 AC131212.1-201ENST00000613771 668 ntBASIC21.7■■□□□ 1.06
CDCP1Q9H5V8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCP1Q9H5V8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCP1Q9H5V8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCP1Q9H5V8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDCP1Q9H5V8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCP1Q9H5V8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCP1Q9H5V8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCP1Q9H5V8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDCP1Q9H5V8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCP1Q9H5V8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCP1Q9H5V8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCP1Q9H5V8 AC145676.1-201ENST00000514988 2004 ntBASIC21.67■■□□□ 1.06
CDCP1Q9H5V8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCP1Q9H5V8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CDCP1Q9H5V8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDCP1Q9H5V8 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.67■■□□□ 1.06
CDCP1Q9H5V8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.67■■□□□ 1.06
CDCP1Q9H5V8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCP1Q9H5V8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 AC090877.2-201ENST00000558441 1738 ntBASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 TSPY9P-201ENST00000440215 945 ntBASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 TSPY11P-201ENST00000442607 1045 ntBASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 UNC93B8-201ENST00000511903 705 ntBASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCP1Q9H5V8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.65■■□□□ 1.06
CDCP1Q9H5V8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.65■■□□□ 1.06
CDCP1Q9H5V8 AC092028.1-203ENST00000608262 953 ntBASIC21.65■■□□□ 1.06
CDCP1Q9H5V8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCP1Q9H5V8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCP1Q9H5V8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.64■■□□□ 1.05
CDCP1Q9H5V8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDCP1Q9H5V8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDCP1Q9H5V8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCP1Q9H5V8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCP1Q9H5V8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCP1Q9H5V8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCP1Q9H5V8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCP1Q9H5V8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
CDCP1Q9H5V8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCP1Q9H5V8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCP1Q9H5V8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
CDCP1Q9H5V8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CDCP1Q9H5V8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDCP1Q9H5V8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 KRT16P3-201ENST00000439127 1283 ntBASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 AF131216.4-201ENST00000638924 1588 ntBASIC21.61■■□□□ 1.05
CDCP1Q9H5V8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCP1Q9H5V8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCP1Q9H5V8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCP1Q9H5V8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCP1Q9H5V8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.6■■□□□ 1.05
CDCP1Q9H5V8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.6■■□□□ 1.05
CDCP1Q9H5V8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCP1Q9H5V8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCP1Q9H5V8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCP1Q9H5V8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDCP1Q9H5V8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCP1Q9H5V8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDCP1Q9H5V8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCP1Q9H5V8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCP1Q9H5V8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms