Protein–RNA interactions for Protein: Q9GZV3

SLC5A7, High affinity choline transporter 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A7Q9GZV3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC5A7Q9GZV3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC5A7Q9GZV3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC5A7Q9GZV3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC5A7Q9GZV3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC5A7Q9GZV3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC5A7Q9GZV3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC5A7Q9GZV3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC5A7Q9GZV3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SLC5A7Q9GZV3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC5A7Q9GZV3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC5A7Q9GZV3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC5A7Q9GZV3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC5A7Q9GZV3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC5A7Q9GZV3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
SLC5A7Q9GZV3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SLC5A7Q9GZV3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC5A7Q9GZV3 AC141586.4-201ENST00000624558 1573 ntBASIC19.55■□□□□ 0.72
SLC5A7Q9GZV3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC5A7Q9GZV3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SLC5A7Q9GZV3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC5A7Q9GZV3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC5A7Q9GZV3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC5A7Q9GZV3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SLC5A7Q9GZV3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC5A7Q9GZV3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC5A7Q9GZV3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC5A7Q9GZV3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC5A7Q9GZV3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SLC5A7Q9GZV3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC5A7Q9GZV3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 DUSP8P5-201ENST00000422884 1815 ntBASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC5A7Q9GZV3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SLC5A7Q9GZV3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC5A7Q9GZV3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC5A7Q9GZV3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC5A7Q9GZV3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SLC5A7Q9GZV3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC5A7Q9GZV3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC5A7Q9GZV3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC5A7Q9GZV3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SLC5A7Q9GZV3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC5A7Q9GZV3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC5A7Q9GZV3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
SLC5A7Q9GZV3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC5A7Q9GZV3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC5A7Q9GZV3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC5A7Q9GZV3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.51■□□□□ 0.71
SLC5A7Q9GZV3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC5A7Q9GZV3 MIR3648-2-201ENST00000581792 180 ntBASIC19.51■□□□□ 0.71
SLC5A7Q9GZV3 MIR3648-1-201ENST00000615959 180 ntBASIC19.51■□□□□ 0.71
SLC5A7Q9GZV3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC5A7Q9GZV3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC5A7Q9GZV3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC5A7Q9GZV3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC5A7Q9GZV3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC5A7Q9GZV3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SLC5A7Q9GZV3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC5A7Q9GZV3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC5A7Q9GZV3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
SLC5A7Q9GZV3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
SLC5A7Q9GZV3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC5A7Q9GZV3 MIR3960-201ENST00000583311 91 ntBASIC19.48■□□□□ 0.71
SLC5A7Q9GZV3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SLC5A7Q9GZV3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms