Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NICN1Q9BSH3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NICN1Q9BSH3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NICN1Q9BSH3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NICN1Q9BSH3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NICN1Q9BSH3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.95■□□□□ 0.78
NICN1Q9BSH3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NICN1Q9BSH3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
NICN1Q9BSH3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NICN1Q9BSH3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.94■□□□□ 0.78
NICN1Q9BSH3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NICN1Q9BSH3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NICN1Q9BSH3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NICN1Q9BSH3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NICN1Q9BSH3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NICN1Q9BSH3 AC092296.2-201ENST00000589470 999 ntBASIC19.94■□□□□ 0.78
NICN1Q9BSH3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NICN1Q9BSH3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.94■□□□□ 0.78
NICN1Q9BSH3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NICN1Q9BSH3 AC012676.1-201ENST00000574705 1949 ntBASIC19.94■□□□□ 0.78
NICN1Q9BSH3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NICN1Q9BSH3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.92■□□□□ 0.78
NICN1Q9BSH3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NICN1Q9BSH3 HLA-L-211ENST00000482052 1765 ntBASIC19.92■□□□□ 0.78
NICN1Q9BSH3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NICN1Q9BSH3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NICN1Q9BSH3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NICN1Q9BSH3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
NICN1Q9BSH3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 DUSP8P5-201ENST00000422884 1815 ntBASIC19.91■□□□□ 0.78
NICN1Q9BSH3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NICN1Q9BSH3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NICN1Q9BSH3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NICN1Q9BSH3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NICN1Q9BSH3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NICN1Q9BSH3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NICN1Q9BSH3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NICN1Q9BSH3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NICN1Q9BSH3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NICN1Q9BSH3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NICN1Q9BSH3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NICN1Q9BSH3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NICN1Q9BSH3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NICN1Q9BSH3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NICN1Q9BSH3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NICN1Q9BSH3 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.89■□□□□ 0.77
NICN1Q9BSH3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.89■□□□□ 0.77
NICN1Q9BSH3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 RP9P-202ENST00000450133 1212 ntBASIC19.88■□□□□ 0.77
NICN1Q9BSH3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NICN1Q9BSH3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NICN1Q9BSH3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NICN1Q9BSH3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.87■□□□□ 0.77
NICN1Q9BSH3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NICN1Q9BSH3 AC093536.1-201ENST00000569153 554 ntBASIC19.87■□□□□ 0.77
NICN1Q9BSH3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NICN1Q9BSH3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.86■□□□□ 0.77
NICN1Q9BSH3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NICN1Q9BSH3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.86■□□□□ 0.77
NICN1Q9BSH3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.86■□□□□ 0.77
NICN1Q9BSH3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NICN1Q9BSH3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
NICN1Q9BSH3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NICN1Q9BSH3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms