Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
BBS4Q96RK4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
BBS4Q96RK4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
BBS4Q96RK4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BBS4Q96RK4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BBS4Q96RK4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BBS4Q96RK4 AL592295.1-201ENST00000400984 884 ntBASIC22.04■■□□□ 1.12
BBS4Q96RK4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
BBS4Q96RK4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
BBS4Q96RK4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.04■■□□□ 1.12
BBS4Q96RK4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BBS4Q96RK4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
BBS4Q96RK4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BBS4Q96RK4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BBS4Q96RK4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
BBS4Q96RK4 LONRF2P2-201ENST00000439212 571 ntBASIC22.03■■□□□ 1.12
BBS4Q96RK4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.03■■□□□ 1.12
BBS4Q96RK4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.03■■□□□ 1.12
BBS4Q96RK4 BHLHE23-202ENST00000612929 1109 ntBASIC22.03■■□□□ 1.12
BBS4Q96RK4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.03■■□□□ 1.12
BBS4Q96RK4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
BBS4Q96RK4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BBS4Q96RK4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BBS4Q96RK4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
BBS4Q96RK4 AC004987.1-201ENST00000428627 508 ntBASIC22.02■■□□□ 1.12
BBS4Q96RK4 ATP5G2P3-201ENST00000429083 425 ntBASIC22.02■■□□□ 1.12
BBS4Q96RK4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
BBS4Q96RK4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
BBS4Q96RK4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
BBS4Q96RK4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
BBS4Q96RK4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BBS4Q96RK4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
BBS4Q96RK4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
BBS4Q96RK4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22■■□□□ 1.11
BBS4Q96RK4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22■■□□□ 1.11
BBS4Q96RK4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22■■□□□ 1.11
BBS4Q96RK4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22■■□□□ 1.11
BBS4Q96RK4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BBS4Q96RK4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BBS4Q96RK4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
BBS4Q96RK4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.99■■□□□ 1.11
BBS4Q96RK4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BBS4Q96RK4 TSPY13P-201ENST00000338964 914 ntBASIC21.98■■□□□ 1.11
BBS4Q96RK4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
BBS4Q96RK4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
BBS4Q96RK4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
BBS4Q96RK4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BBS4Q96RK4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.98■■□□□ 1.11
BBS4Q96RK4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BBS4Q96RK4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BBS4Q96RK4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.97■■□□□ 1.11
BBS4Q96RK4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BBS4Q96RK4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BBS4Q96RK4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
BBS4Q96RK4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.97■■□□□ 1.11
BBS4Q96RK4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BBS4Q96RK4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BBS4Q96RK4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BBS4Q96RK4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
BBS4Q96RK4 LINC00543-201ENST00000567234 1845 ntBASIC21.96■■□□□ 1.11
BBS4Q96RK4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS4Q96RK4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS4Q96RK4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.96■■□□□ 1.11
BBS4Q96RK4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS4Q96RK4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS4Q96RK4 AC141586.4-201ENST00000624558 1573 ntBASIC21.96■■□□□ 1.11
BBS4Q96RK4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.96■■□□□ 1.11
BBS4Q96RK4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.96■■□□□ 1.11
BBS4Q96RK4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS4Q96RK4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS4Q96RK4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
BBS4Q96RK4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.96■■□□□ 1.11
BBS4Q96RK4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS4Q96RK4 AC090877.2-201ENST00000558441 1738 ntBASIC21.96■■□□□ 1.11
BBS4Q96RK4 HLA-L-211ENST00000482052 1765 ntBASIC21.96■■□□□ 1.11
BBS4Q96RK4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
BBS4Q96RK4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BBS4Q96RK4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
BBS4Q96RK4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
BBS4Q96RK4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
BBS4Q96RK4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BBS4Q96RK4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BBS4Q96RK4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.95■■□□□ 1.1
BBS4Q96RK4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BBS4Q96RK4 AC012354.3-201ENST00000623734 483 ntBASIC21.95■■□□□ 1.1
BBS4Q96RK4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.95■■□□□ 1.1
BBS4Q96RK4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BBS4Q96RK4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.95■■□□□ 1.1
BBS4Q96RK4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
BBS4Q96RK4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BBS4Q96RK4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.94■■□□□ 1.1
BBS4Q96RK4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BBS4Q96RK4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.94■■□□□ 1.1
BBS4Q96RK4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.94■■□□□ 1.1
BBS4Q96RK4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BBS4Q96RK4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
BBS4Q96RK4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BBS4Q96RK4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
BBS4Q96RK4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.94■■□□□ 1.1
BBS4Q96RK4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms