Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.4■□□□□ 0.86
CPEB3Q8NE35 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CPEB3Q8NE35 AC022616.5-201ENST00000518796 181 ntBASIC20.4■□□□□ 0.86
CPEB3Q8NE35 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPEB3Q8NE35 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.4■□□□□ 0.86
CPEB3Q8NE35 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.4■□□□□ 0.86
CPEB3Q8NE35 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPEB3Q8NE35 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.4■□□□□ 0.86
CPEB3Q8NE35 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPEB3Q8NE35 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPEB3Q8NE35 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPEB3Q8NE35 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPEB3Q8NE35 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CPEB3Q8NE35 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.39■□□□□ 0.86
CPEB3Q8NE35 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.39■□□□□ 0.85
CPEB3Q8NE35 AC103834.1-201ENST00000520383 144 ntBASIC20.39■□□□□ 0.85
CPEB3Q8NE35 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.39■□□□□ 0.85
CPEB3Q8NE35 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CPEB3Q8NE35 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.39■□□□□ 0.85
CPEB3Q8NE35 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPEB3Q8NE35 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPEB3Q8NE35 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPEB3Q8NE35 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.38■□□□□ 0.85
CPEB3Q8NE35 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.38■□□□□ 0.85
CPEB3Q8NE35 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPEB3Q8NE35 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPEB3Q8NE35 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPEB3Q8NE35 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPEB3Q8NE35 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPEB3Q8NE35 KRT8P33-201ENST00000508125 1423 ntBASIC20.37■□□□□ 0.85
CPEB3Q8NE35 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CPEB3Q8NE35 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPEB3Q8NE35 AC090877.2-201ENST00000558441 1738 ntBASIC20.37■□□□□ 0.85
CPEB3Q8NE35 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPEB3Q8NE35 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.37■□□□□ 0.85
CPEB3Q8NE35 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPEB3Q8NE35 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPEB3Q8NE35 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPEB3Q8NE35 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CPEB3Q8NE35 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPEB3Q8NE35 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPEB3Q8NE35 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.36■□□□□ 0.85
CPEB3Q8NE35 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.36■□□□□ 0.85
CPEB3Q8NE35 MIR4508-201ENST00000584178 70 ntBASIC20.36■□□□□ 0.85
CPEB3Q8NE35 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.36■□□□□ 0.85
CPEB3Q8NE35 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPEB3Q8NE35 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPEB3Q8NE35 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPEB3Q8NE35 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPEB3Q8NE35 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPEB3Q8NE35 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CPEB3Q8NE35 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CPEB3Q8NE35 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPEB3Q8NE35 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.35■□□□□ 0.85
CPEB3Q8NE35 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
CPEB3Q8NE35 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPEB3Q8NE35 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPEB3Q8NE35 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CPEB3Q8NE35 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPEB3Q8NE35 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.34■□□□□ 0.85
CPEB3Q8NE35 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CPEB3Q8NE35 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.34■□□□□ 0.85
CPEB3Q8NE35 AL139125.2-201ENST00000623134 1869 ntBASIC20.33■□□□□ 0.85
CPEB3Q8NE35 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.33■□□□□ 0.85
CPEB3Q8NE35 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.33■□□□□ 0.85
CPEB3Q8NE35 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.33■□□□□ 0.85
CPEB3Q8NE35 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPEB3Q8NE35 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CPEB3Q8NE35 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.33■□□□□ 0.84
CPEB3Q8NE35 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 YBX1P4-201ENST00000392794 808 ntBASIC20.32■□□□□ 0.84
CPEB3Q8NE35 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPEB3Q8NE35 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CPEB3Q8NE35 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPEB3Q8NE35 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPEB3Q8NE35 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CPEB3Q8NE35 AC120024.1-201ENST00000562672 995 ntBASIC20.31■□□□□ 0.84
CPEB3Q8NE35 AC011551.1-201ENST00000614101 683 ntBASIC20.31■□□□□ 0.84
CPEB3Q8NE35 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.31■□□□□ 0.84
CPEB3Q8NE35 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPEB3Q8NE35 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPEB3Q8NE35 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPEB3Q8NE35 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.3■□□□□ 0.84
CPEB3Q8NE35 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPEB3Q8NE35 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.3■□□□□ 0.84
CPEB3Q8NE35 KRT18P24-201ENST00000344739 1156 ntBASIC20.3■□□□□ 0.84
CPEB3Q8NE35 AC103724.3-201ENST00000564481 992 ntBASIC20.3■□□□□ 0.84
CPEB3Q8NE35 HLA-L-211ENST00000482052 1765 ntBASIC20.3■□□□□ 0.84
CPEB3Q8NE35 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPEB3Q8NE35 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPEB3Q8NE35 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms