Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LRTM2Q8N967 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LRTM2Q8N967 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRTM2Q8N967 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM2Q8N967 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
LRTM2Q8N967 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRTM2Q8N967 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM2Q8N967 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.09■□□□□ 0.65
LRTM2Q8N967 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM2Q8N967 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM2Q8N967 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM2Q8N967 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRTM2Q8N967 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRTM2Q8N967 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRTM2Q8N967 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
LRTM2Q8N967 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM2Q8N967 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LRTM2Q8N967 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM2Q8N967 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM2Q8N967 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.07■□□□□ 0.64
LRTM2Q8N967 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.07■□□□□ 0.64
LRTM2Q8N967 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.07■□□□□ 0.64
LRTM2Q8N967 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRTM2Q8N967 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRTM2Q8N967 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.07■□□□□ 0.64
LRTM2Q8N967 DUX4L11-201ENST00000611504 1267 ntBASIC19.07■□□□□ 0.64
LRTM2Q8N967 DUX4L12-201ENST00000614593 1267 ntBASIC19.07■□□□□ 0.64
LRTM2Q8N967 DUX4L14-201ENST00000621227 1267 ntBASIC19.07■□□□□ 0.64
LRTM2Q8N967 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRTM2Q8N967 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.07■□□□□ 0.64
LRTM2Q8N967 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LRTM2Q8N967 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.07■□□□□ 0.64
LRTM2Q8N967 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.06■□□□□ 0.64
LRTM2Q8N967 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.06■□□□□ 0.64
LRTM2Q8N967 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRTM2Q8N967 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRTM2Q8N967 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.06■□□□□ 0.64
LRTM2Q8N967 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
LRTM2Q8N967 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRTM2Q8N967 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRTM2Q8N967 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.06■□□□□ 0.64
LRTM2Q8N967 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRTM2Q8N967 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LRTM2Q8N967 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.06■□□□□ 0.64
LRTM2Q8N967 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRTM2Q8N967 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRTM2Q8N967 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LRTM2Q8N967 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRTM2Q8N967 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRTM2Q8N967 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRTM2Q8N967 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRTM2Q8N967 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRTM2Q8N967 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRTM2Q8N967 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
LRTM2Q8N967 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRTM2Q8N967 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRTM2Q8N967 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.05■□□□□ 0.64
LRTM2Q8N967 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRTM2Q8N967 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LRTM2Q8N967 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRTM2Q8N967 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRTM2Q8N967 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRTM2Q8N967 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.04■□□□□ 0.64
LRTM2Q8N967 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRTM2Q8N967 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRTM2Q8N967 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRTM2Q8N967 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRTM2Q8N967 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRTM2Q8N967 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRTM2Q8N967 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRTM2Q8N967 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
LRTM2Q8N967 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRTM2Q8N967 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRTM2Q8N967 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.03■□□□□ 0.64
LRTM2Q8N967 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRTM2Q8N967 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRTM2Q8N967 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRTM2Q8N967 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM2Q8N967 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM2Q8N967 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM2Q8N967 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM2Q8N967 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM2Q8N967 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.02■□□□□ 0.64
LRTM2Q8N967 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.02■□□□□ 0.64
LRTM2Q8N967 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM2Q8N967 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LRTM2Q8N967 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM2Q8N967 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRTM2Q8N967 AC233723.2-201ENST00000623798 2106 ntBASIC19.01■□□□□ 0.63
LRTM2Q8N967 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRTM2Q8N967 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM2Q8N967 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM2Q8N967 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRTM2Q8N967 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM2Q8N967 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM2Q8N967 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRTM2Q8N967 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRTM2Q8N967 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRTM2Q8N967 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19■□□□□ 0.63
LRTM2Q8N967 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms