Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FAM90A1Q86YD7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FAM90A1Q86YD7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.67■□□□□ 0.74
FAM90A1Q86YD7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
FAM90A1Q86YD7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FAM90A1Q86YD7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FAM90A1Q86YD7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FAM90A1Q86YD7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.66■□□□□ 0.74
FAM90A1Q86YD7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.66■□□□□ 0.74
FAM90A1Q86YD7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.66■□□□□ 0.74
FAM90A1Q86YD7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.66■□□□□ 0.74
FAM90A1Q86YD7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
FAM90A1Q86YD7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FAM90A1Q86YD7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
FAM90A1Q86YD7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
FAM90A1Q86YD7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FAM90A1Q86YD7 AC103724.3-201ENST00000564481 992 ntBASIC19.65■□□□□ 0.74
FAM90A1Q86YD7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.65■□□□□ 0.74
FAM90A1Q86YD7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FAM90A1Q86YD7 AC011551.1-201ENST00000614101 683 ntBASIC19.64■□□□□ 0.73
FAM90A1Q86YD7 AC090877.2-201ENST00000558441 1738 ntBASIC19.64■□□□□ 0.73
FAM90A1Q86YD7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
FAM90A1Q86YD7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FAM90A1Q86YD7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.64■□□□□ 0.73
FAM90A1Q86YD7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.64■□□□□ 0.73
FAM90A1Q86YD7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FAM90A1Q86YD7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FAM90A1Q86YD7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM90A1Q86YD7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FAM90A1Q86YD7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.63■□□□□ 0.73
FAM90A1Q86YD7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
FAM90A1Q86YD7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FAM90A1Q86YD7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
FAM90A1Q86YD7 AL139125.2-201ENST00000623134 1869 ntBASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 AC120024.1-201ENST00000562672 995 ntBASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FAM90A1Q86YD7 AC141586.4-201ENST00000624558 1573 ntBASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 KRT18P24-201ENST00000344739 1156 ntBASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 THA1P-201ENST00000590384 1145 ntBASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
FAM90A1Q86YD7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
FAM90A1Q86YD7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
FAM90A1Q86YD7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FAM90A1Q86YD7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FAM90A1Q86YD7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FAM90A1Q86YD7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FAM90A1Q86YD7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FAM90A1Q86YD7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FAM90A1Q86YD7 AL031848.2-201ENST00000607670 837 ntBASIC19.59■□□□□ 0.73
FAM90A1Q86YD7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FAM90A1Q86YD7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.59■□□□□ 0.73
FAM90A1Q86YD7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
FAM90A1Q86YD7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
FAM90A1Q86YD7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FAM90A1Q86YD7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.58■□□□□ 0.72
FAM90A1Q86YD7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FAM90A1Q86YD7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FAM90A1Q86YD7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
FAM90A1Q86YD7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FAM90A1Q86YD7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FAM90A1Q86YD7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FAM90A1Q86YD7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FAM90A1Q86YD7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FAM90A1Q86YD7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FAM90A1Q86YD7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FAM90A1Q86YD7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FAM90A1Q86YD7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.56■□□□□ 0.72
FAM90A1Q86YD7 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.56■□□□□ 0.72
FAM90A1Q86YD7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.56■□□□□ 0.72
FAM90A1Q86YD7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM90A1Q86YD7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.56■□□□□ 0.72
FAM90A1Q86YD7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FAM90A1Q86YD7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM90A1Q86YD7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM90A1Q86YD7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
FAM90A1Q86YD7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM90A1Q86YD7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM90A1Q86YD7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.55■□□□□ 0.72
FAM90A1Q86YD7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FAM90A1Q86YD7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.55■□□□□ 0.72
FAM90A1Q86YD7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM90A1Q86YD7 LINC00543-201ENST00000567234 1845 ntBASIC19.54■□□□□ 0.72
FAM90A1Q86YD7 MIR4281-201ENST00000580852 62 ntBASIC19.54■□□□□ 0.72
FAM90A1Q86YD7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms