Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PVT1_1.1-201ENST00000615125 194 ntBASIC28.66■■■□□ 2.18
PDE1AP54750 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PDE1AP54750 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
PDE1AP54750 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.65■■■□□ 2.18
PDE1AP54750 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PDE1AP54750 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.65■■■□□ 2.18
PDE1AP54750 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PDE1AP54750 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PDE1AP54750 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.65■■■□□ 2.18
PDE1AP54750 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.65■■■□□ 2.18
PDE1AP54750 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PDE1AP54750 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
PDE1AP54750 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PDE1AP54750 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.65■■■□□ 2.18
PDE1AP54750 LINC00543-201ENST00000567234 1845 ntBASIC28.64■■■□□ 2.18
PDE1AP54750 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.64■■■□□ 2.18
PDE1AP54750 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC28.64■■■□□ 2.18
PDE1AP54750 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC28.64■■■□□ 2.18
PDE1AP54750 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.64■■■□□ 2.18
PDE1AP54750 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
PDE1AP54750 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PDE1AP54750 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
PDE1AP54750 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.64■■■□□ 2.17
PDE1AP54750 AC090877.2-201ENST00000558441 1738 ntBASIC28.63■■■□□ 2.17
PDE1AP54750 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PDE1AP54750 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
PDE1AP54750 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PDE1AP54750 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PDE1AP54750 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
PDE1AP54750 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
PDE1AP54750 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.62■■■□□ 2.17
PDE1AP54750 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PDE1AP54750 AL033527.3-201ENST00000566366 1196 ntBASIC28.62■■■□□ 2.17
PDE1AP54750 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PDE1AP54750 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.61■■■□□ 2.17
PDE1AP54750 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PDE1AP54750 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.61■■■□□ 2.17
PDE1AP54750 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.61■■■□□ 2.17
PDE1AP54750 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PDE1AP54750 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
PDE1AP54750 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PDE1AP54750 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.6■■■□□ 2.17
PDE1AP54750 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.6■■■□□ 2.17
PDE1AP54750 BHLHE23-202ENST00000612929 1109 ntBASIC28.6■■■□□ 2.17
PDE1AP54750 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PDE1AP54750 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PDE1AP54750 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
PDE1AP54750 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.6■■■□□ 2.17
PDE1AP54750 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDE1AP54750 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDE1AP54750 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.59■■■□□ 2.17
PDE1AP54750 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDE1AP54750 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDE1AP54750 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.59■■■□□ 2.17
PDE1AP54750 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDE1AP54750 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDE1AP54750 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PDE1AP54750 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PDE1AP54750 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.58■■■□□ 2.17
PDE1AP54750 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
PDE1AP54750 AC010980.1-201ENST00000587192 1142 ntBASIC28.58■■■□□ 2.17
PDE1AP54750 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PDE1AP54750 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
PDE1AP54750 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.58■■■□□ 2.16
PDE1AP54750 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.57■■■□□ 2.16
PDE1AP54750 AC074183.2-201ENST00000623112 922 ntBASIC28.57■■■□□ 2.16
PDE1AP54750 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PDE1AP54750 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PDE1AP54750 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
PDE1AP54750 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.56■■■□□ 2.16
PDE1AP54750 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
PDE1AP54750 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PDE1AP54750 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.56■■■□□ 2.16
PDE1AP54750 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.56■■■□□ 2.16
PDE1AP54750 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PDE1AP54750 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PDE1AP54750 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PDE1AP54750 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.55■■■□□ 2.16
PDE1AP54750 AC141586.4-201ENST00000624558 1573 ntBASIC28.54■■■□□ 2.16
PDE1AP54750 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.54■■■□□ 2.16
PDE1AP54750 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PDE1AP54750 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PDE1AP54750 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.54■■■□□ 2.16
PDE1AP54750 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.53■■■□□ 2.16
PDE1AP54750 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
PDE1AP54750 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PDE1AP54750 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.53■■■□□ 2.16
PDE1AP54750 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.53■■■□□ 2.16
PDE1AP54750 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC28.53■■■□□ 2.16
PDE1AP54750 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
PDE1AP54750 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PDE1AP54750 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PDE1AP54750 AC022616.5-201ENST00000518796 181 ntBASIC28.52■■■□□ 2.16
PDE1AP54750 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.52■■■□□ 2.16
PDE1AP54750 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PDE1AP54750 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
PDE1AP54750 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PDE1AP54750 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.51■■■□□ 2.15
PDE1AP54750 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PDE1AP54750 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms