Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HTR3AP46098 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HTR3AP46098 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HTR3AP46098 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HTR3AP46098 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HTR3AP46098 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HTR3AP46098 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
HTR3AP46098 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.42■■□□□ 1.02
HTR3AP46098 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HTR3AP46098 AC068473.5-201ENST00000616428 2072 ntBASIC21.42■■□□□ 1.02
HTR3AP46098 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HTR3AP46098 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HTR3AP46098 FOXO3B-201ENST00000395675 1928 ntBASIC21.41■■□□□ 1.02
HTR3AP46098 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HTR3AP46098 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HTR3AP46098 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.41■■□□□ 1.02
HTR3AP46098 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HTR3AP46098 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.41■■□□□ 1.02
HTR3AP46098 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HTR3AP46098 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
HTR3AP46098 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HTR3AP46098 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.4■■□□□ 1.02
HTR3AP46098 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HTR3AP46098 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.4■■□□□ 1.02
HTR3AP46098 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.4■■□□□ 1.02
HTR3AP46098 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.4■■□□□ 1.02
HTR3AP46098 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.4■■□□□ 1.02
HTR3AP46098 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HTR3AP46098 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.4■■□□□ 1.02
HTR3AP46098 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.4■■□□□ 1.02
HTR3AP46098 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
HTR3AP46098 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HTR3AP46098 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HTR3AP46098 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HTR3AP46098 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HTR3AP46098 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
HTR3AP46098 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HTR3AP46098 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HTR3AP46098 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HTR3AP46098 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.39■■□□□ 1.01
HTR3AP46098 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HTR3AP46098 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HTR3AP46098 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HTR3AP46098 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.38■■□□□ 1.01
HTR3AP46098 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HTR3AP46098 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTR3AP46098 AP003733.4-201ENST00000623785 1697 ntBASIC21.38■■□□□ 1.01
HTR3AP46098 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTR3AP46098 ATP5G2P3-201ENST00000429083 425 ntBASIC21.38■■□□□ 1.01
HTR3AP46098 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTR3AP46098 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTR3AP46098 AC139795.1-202ENST00000500444 432 ntBASIC21.38■■□□□ 1.01
HTR3AP46098 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HTR3AP46098 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.38■■□□□ 1.01
HTR3AP46098 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTR3AP46098 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTR3AP46098 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTR3AP46098 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTR3AP46098 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.37■■□□□ 1.01
HTR3AP46098 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTR3AP46098 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTR3AP46098 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTR3AP46098 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTR3AP46098 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.36■■□□□ 1.01
HTR3AP46098 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.36■■□□□ 1.01
HTR3AP46098 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 TSPY13P-201ENST00000338964 914 ntBASIC21.36■■□□□ 1.01
HTR3AP46098 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 AC004987.1-201ENST00000428627 508 ntBASIC21.36■■□□□ 1.01
HTR3AP46098 LONRF2P2-201ENST00000439212 571 ntBASIC21.36■■□□□ 1.01
HTR3AP46098 DUX4L18-201ENST00000553347 1267 ntBASIC21.36■■□□□ 1.01
HTR3AP46098 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 AC012354.3-201ENST00000623734 483 ntBASIC21.36■■□□□ 1.01
HTR3AP46098 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HTR3AP46098 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HTR3AP46098 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR3AP46098 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTR3AP46098 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTR3AP46098 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTR3AP46098 AL592295.1-201ENST00000400984 884 ntBASIC21.35■■□□□ 1.01
HTR3AP46098 MIR6089-201ENST00000616698 64 ntBASIC21.35■■□□□ 1.01
HTR3AP46098 AC074183.2-201ENST00000623112 922 ntBASIC21.35■■□□□ 1.01
HTR3AP46098 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.35■■□□□ 1.01
HTR3AP46098 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.35■■□□□ 1.01
HTR3AP46098 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.35■■□□□ 1.01
HTR3AP46098 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTR3AP46098 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTR3AP46098 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTR3AP46098 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.34■■□□□ 1.01
HTR3AP46098 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.34■■□□□ 1.01
HTR3AP46098 AC138932.3-201ENST00000567634 1902 ntBASIC21.34■■□□□ 1.01
HTR3AP46098 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTR3AP46098 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms