Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
BCKDHAP12694 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
BCKDHAP12694 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.29■■□□□ 1.16
BCKDHAP12694 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BCKDHAP12694 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
BCKDHAP12694 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
BCKDHAP12694 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BCKDHAP12694 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BCKDHAP12694 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BCKDHAP12694 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
BCKDHAP12694 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.29■■□□□ 1.16
BCKDHAP12694 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
BCKDHAP12694 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
BCKDHAP12694 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.28■■□□□ 1.16
BCKDHAP12694 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
BCKDHAP12694 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
BCKDHAP12694 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BCKDHAP12694 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.28■■□□□ 1.16
BCKDHAP12694 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.28■■□□□ 1.16
BCKDHAP12694 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
BCKDHAP12694 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BCKDHAP12694 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.28■■□□□ 1.16
BCKDHAP12694 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
BCKDHAP12694 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BCKDHAP12694 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.28■■□□□ 1.16
BCKDHAP12694 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
BCKDHAP12694 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
BCKDHAP12694 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BCKDHAP12694 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BCKDHAP12694 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.27■■□□□ 1.16
BCKDHAP12694 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
BCKDHAP12694 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BCKDHAP12694 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.27■■□□□ 1.16
BCKDHAP12694 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BCKDHAP12694 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BCKDHAP12694 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
BCKDHAP12694 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.27■■□□□ 1.15
BCKDHAP12694 ABCB10P4-201ENST00000566803 2184 ntBASIC22.26■■□□□ 1.15
BCKDHAP12694 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
BCKDHAP12694 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
BCKDHAP12694 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.26■■□□□ 1.15
BCKDHAP12694 RPS2P7-201ENST00000447334 885 ntBASIC22.26■■□□□ 1.15
BCKDHAP12694 AL592293.1-201ENST00000502889 1188 ntBASIC22.26■■□□□ 1.15
BCKDHAP12694 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.26■■□□□ 1.15
BCKDHAP12694 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
BCKDHAP12694 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
BCKDHAP12694 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
BCKDHAP12694 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BCKDHAP12694 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BCKDHAP12694 SPCS2P3-201ENST00000500401 656 ntBASIC22.25■■□□□ 1.15
BCKDHAP12694 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BCKDHAP12694 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BCKDHAP12694 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BCKDHAP12694 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BCKDHAP12694 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
BCKDHAP12694 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BCKDHAP12694 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
BCKDHAP12694 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.25■■□□□ 1.15
BCKDHAP12694 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.24■■□□□ 1.15
BCKDHAP12694 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BCKDHAP12694 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.24■■□□□ 1.15
BCKDHAP12694 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.24■■□□□ 1.15
BCKDHAP12694 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
BCKDHAP12694 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.24■■□□□ 1.15
BCKDHAP12694 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BCKDHAP12694 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BCKDHAP12694 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.23■■□□□ 1.15
BCKDHAP12694 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BCKDHAP12694 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BCKDHAP12694 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BCKDHAP12694 AC018755.3-202ENST00000596210 929 ntBASIC22.23■■□□□ 1.15
BCKDHAP12694 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.23■■□□□ 1.15
BCKDHAP12694 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
BCKDHAP12694 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BCKDHAP12694 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
BCKDHAP12694 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BCKDHAP12694 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
BCKDHAP12694 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
BCKDHAP12694 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BCKDHAP12694 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BCKDHAP12694 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
BCKDHAP12694 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BCKDHAP12694 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.21■■□□□ 1.15
BCKDHAP12694 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
BCKDHAP12694 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.21■■□□□ 1.15
BCKDHAP12694 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
BCKDHAP12694 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
BCKDHAP12694 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BCKDHAP12694 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
BCKDHAP12694 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
BCKDHAP12694 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
BCKDHAP12694 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.2■■□□□ 1.14
BCKDHAP12694 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BCKDHAP12694 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BCKDHAP12694 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
BCKDHAP12694 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
BCKDHAP12694 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.19■■□□□ 1.14
BCKDHAP12694 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
BCKDHAP12694 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.19■■□□□ 1.14
BCKDHAP12694 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms