Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCATP04180 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCATP04180 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCATP04180 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
LCATP04180 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.32■□□□□ 0.84
LCATP04180 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCATP04180 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LCATP04180 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCATP04180 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCATP04180 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCATP04180 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LCATP04180 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCATP04180 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCATP04180 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCATP04180 AL592295.1-201ENST00000400984 884 ntBASIC20.31■□□□□ 0.84
LCATP04180 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.31■□□□□ 0.84
LCATP04180 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCATP04180 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCATP04180 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.31■□□□□ 0.84
LCATP04180 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCATP04180 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCATP04180 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCATP04180 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCATP04180 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCATP04180 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCATP04180 AC004987.1-201ENST00000428627 508 ntBASIC20.3■□□□□ 0.84
LCATP04180 LONRF2P2-201ENST00000439212 571 ntBASIC20.3■□□□□ 0.84
LCATP04180 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LCATP04180 BHLHE23-202ENST00000612929 1109 ntBASIC20.3■□□□□ 0.84
LCATP04180 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.3■□□□□ 0.84
LCATP04180 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.3■□□□□ 0.84
LCATP04180 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCATP04180 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCATP04180 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCATP04180 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCATP04180 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LCATP04180 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCATP04180 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCATP04180 ATP5G2P3-201ENST00000429083 425 ntBASIC20.29■□□□□ 0.84
LCATP04180 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.29■□□□□ 0.84
LCATP04180 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.29■□□□□ 0.84
LCATP04180 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
LCATP04180 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LCATP04180 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCATP04180 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCATP04180 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LCATP04180 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
LCATP04180 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCATP04180 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCATP04180 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCATP04180 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.27■□□□□ 0.84
LCATP04180 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.27■□□□□ 0.83
LCATP04180 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.26■□□□□ 0.83
LCATP04180 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCATP04180 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LCATP04180 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCATP04180 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LCATP04180 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.26■□□□□ 0.83
LCATP04180 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCATP04180 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LCATP04180 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCATP04180 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LCATP04180 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.25■□□□□ 0.83
LCATP04180 TSPY13P-201ENST00000338964 914 ntBASIC20.25■□□□□ 0.83
LCATP04180 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LCATP04180 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCATP04180 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCATP04180 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LCATP04180 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.25■□□□□ 0.83
LCATP04180 HLA-L-211ENST00000482052 1765 ntBASIC20.24■□□□□ 0.83
LCATP04180 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.24■□□□□ 0.83
LCATP04180 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LCATP04180 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCATP04180 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCATP04180 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LCATP04180 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.24■□□□□ 0.83
LCATP04180 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LCATP04180 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LCATP04180 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCATP04180 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCATP04180 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCATP04180 LINC00543-201ENST00000567234 1845 ntBASIC20.23■□□□□ 0.83
LCATP04180 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LCATP04180 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCATP04180 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LCATP04180 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCATP04180 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LCATP04180 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.23■□□□□ 0.83
LCATP04180 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.23■□□□□ 0.83
LCATP04180 AC012354.3-201ENST00000623734 483 ntBASIC20.23■□□□□ 0.83
LCATP04180 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.23■□□□□ 0.83
LCATP04180 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.23■□□□□ 0.83
LCATP04180 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCATP04180 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.22■□□□□ 0.83
LCATP04180 AC090877.2-201ENST00000558441 1738 ntBASIC20.22■□□□□ 0.83
LCATP04180 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
LCATP04180 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.22■□□□□ 0.83
LCATP04180 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LCATP04180 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.22■□□□□ 0.83
LCATP04180 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms