Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 AC060814.1-201ENST00000554326 538 ntBASIC20.48■□□□□ 0.87
ALX3O95076 HSD17B1P1-201ENST00000590052 955 ntBASIC20.48■□□□□ 0.87
ALX3O95076 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.48■□□□□ 0.87
ALX3O95076 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALX3O95076 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ALX3O95076 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALX3O95076 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALX3O95076 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.48■□□□□ 0.87
ALX3O95076 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALX3O95076 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ALX3O95076 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALX3O95076 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALX3O95076 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ALX3O95076 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ALX3O95076 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALX3O95076 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ALX3O95076 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.46■□□□□ 0.87
ALX3O95076 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX3O95076 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
ALX3O95076 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.45■□□□□ 0.86
ALX3O95076 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALX3O95076 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALX3O95076 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.45■□□□□ 0.86
ALX3O95076 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALX3O95076 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
ALX3O95076 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ALX3O95076 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ALX3O95076 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.44■□□□□ 0.86
ALX3O95076 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALX3O95076 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ALX3O95076 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALX3O95076 SMPD5-203ENST00000639008 1464 ntBASIC20.44■□□□□ 0.86
ALX3O95076 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALX3O95076 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALX3O95076 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ALX3O95076 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.44■□□□□ 0.86
ALX3O95076 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ALX3O95076 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALX3O95076 AC092296.2-201ENST00000589470 999 ntBASIC20.44■□□□□ 0.86
ALX3O95076 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.44■□□□□ 0.86
ALX3O95076 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALX3O95076 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALX3O95076 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALX3O95076 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALX3O95076 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ALX3O95076 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ALX3O95076 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
ALX3O95076 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ALX3O95076 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.42■□□□□ 0.86
ALX3O95076 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ALX3O95076 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.42■□□□□ 0.86
ALX3O95076 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ALX3O95076 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.42■□□□□ 0.86
ALX3O95076 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ALX3O95076 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ALX3O95076 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.42■□□□□ 0.86
ALX3O95076 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ALX3O95076 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ALX3O95076 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ALX3O95076 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ALX3O95076 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.41■□□□□ 0.86
ALX3O95076 ABCB10P4-201ENST00000566803 2184 ntBASIC20.41■□□□□ 0.86
ALX3O95076 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALX3O95076 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ALX3O95076 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ALX3O95076 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ALX3O95076 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.41■□□□□ 0.86
ALX3O95076 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ALX3O95076 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.4■□□□□ 0.86
ALX3O95076 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ALX3O95076 ECEL1P2-201ENST00000461596 1295 ntBASIC20.4■□□□□ 0.86
ALX3O95076 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.4■□□□□ 0.86
ALX3O95076 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.4■□□□□ 0.86
ALX3O95076 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ALX3O95076 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.39■□□□□ 0.86
ALX3O95076 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
ALX3O95076 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ALX3O95076 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.39■□□□□ 0.86
ALX3O95076 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ALX3O95076 MIR639-201ENST00000384974 98 ntBASIC20.39■□□□□ 0.85
ALX3O95076 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.39■□□□□ 0.85
ALX3O95076 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
ALX3O95076 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ALX3O95076 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALX3O95076 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALX3O95076 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALX3O95076 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms