Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CUBNO60494 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CUBNO60494 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.93■□□□□ 0.62
CUBNO60494 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CUBNO60494 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CUBNO60494 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CUBNO60494 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CUBNO60494 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.92■□□□□ 0.62
CUBNO60494 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CUBNO60494 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.92■□□□□ 0.62
CUBNO60494 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CUBNO60494 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
CUBNO60494 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.92■□□□□ 0.62
CUBNO60494 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CUBNO60494 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.92■□□□□ 0.62
CUBNO60494 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CUBNO60494 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CUBNO60494 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CUBNO60494 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.91■□□□□ 0.62
CUBNO60494 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CUBNO60494 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.91■□□□□ 0.62
CUBNO60494 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CUBNO60494 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CUBNO60494 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.91■□□□□ 0.62
CUBNO60494 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CUBNO60494 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.91■□□□□ 0.62
CUBNO60494 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CUBNO60494 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CUBNO60494 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CUBNO60494 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.9■□□□□ 0.62
CUBNO60494 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CUBNO60494 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.9■□□□□ 0.62
CUBNO60494 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.9■□□□□ 0.62
CUBNO60494 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CUBNO60494 AC022517.1-201ENST00000592429 346 ntBASIC18.9■□□□□ 0.62
CUBNO60494 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CUBNO60494 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.9■□□□□ 0.62
CUBNO60494 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CUBNO60494 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUBNO60494 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CUBNO60494 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.89■□□□□ 0.61
CUBNO60494 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUBNO60494 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.88■□□□□ 0.61
CUBNO60494 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.88■□□□□ 0.61
CUBNO60494 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.88■□□□□ 0.61
CUBNO60494 SYT6-210ENST00000641643 1587 ntBASIC18.88■□□□□ 0.61
CUBNO60494 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.88■□□□□ 0.61
CUBNO60494 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CUBNO60494 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUBNO60494 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.88■□□□□ 0.61
CUBNO60494 FOXO3B-201ENST00000395675 1928 ntBASIC18.87■□□□□ 0.61
CUBNO60494 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CUBNO60494 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.87■□□□□ 0.61
CUBNO60494 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CUBNO60494 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.87■□□□□ 0.61
CUBNO60494 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CUBNO60494 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.87■□□□□ 0.61
CUBNO60494 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.86■□□□□ 0.61
CUBNO60494 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.86■□□□□ 0.61
CUBNO60494 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CUBNO60494 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CUBNO60494 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.86■□□□□ 0.61
CUBNO60494 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.86■□□□□ 0.61
CUBNO60494 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CUBNO60494 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUBNO60494 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUBNO60494 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUBNO60494 AL031602.1-201ENST00000633169 911 ntBASIC18.85■□□□□ 0.61
CUBNO60494 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CUBNO60494 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUBNO60494 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CUBNO60494 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUBNO60494 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUBNO60494 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CUBNO60494 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CUBNO60494 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.85■□□□□ 0.61
CUBNO60494 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CUBNO60494 IRS3P-201ENST00000223076 1006 ntBASIC18.84■□□□□ 0.61
CUBNO60494 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CUBNO60494 MIR4767-201ENST00000582827 78 ntBASIC18.84■□□□□ 0.61
CUBNO60494 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CUBNO60494 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.84■□□□□ 0.61
CUBNO60494 SRD5A1P1-201ENST00000442297 786 ntBASIC18.84■□□□□ 0.61
CUBNO60494 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CUBNO60494 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CUBNO60494 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CUBNO60494 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.83■□□□□ 0.61
CUBNO60494 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.83■□□□□ 0.6
CUBNO60494 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUBNO60494 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.83■□□□□ 0.6
CUBNO60494 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUBNO60494 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.83■□□□□ 0.6
CUBNO60494 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.82■□□□□ 0.6
CUBNO60494 ID1-201ENST00000376105 1233 ntBASIC18.82■□□□□ 0.6
CUBNO60494 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.82■□□□□ 0.6
CUBNO60494 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CUBNO60494 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUBNO60494 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CUBNO60494 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.82■□□□□ 0.6
CUBNO60494 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms