Protein–RNA interactions for Protein: O15270

SPTLC2, Serine palmitoyltransferase 2, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2O15270 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SPTLC2O15270 AC018755.3-202ENST00000596210 929 ntBASIC26.61■■□□□ 1.85
SPTLC2O15270 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
SPTLC2O15270 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPTLC2O15270 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SPTLC2O15270 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SPTLC2O15270 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.6■■□□□ 1.85
SPTLC2O15270 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SPTLC2O15270 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SPTLC2O15270 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
SPTLC2O15270 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SPTLC2O15270 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SPTLC2O15270 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SPTLC2O15270 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.59■■□□□ 1.85
SPTLC2O15270 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SPTLC2O15270 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SPTLC2O15270 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SPTLC2O15270 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.59■■□□□ 1.85
SPTLC2O15270 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SPTLC2O15270 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SPTLC2O15270 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
SPTLC2O15270 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SPTLC2O15270 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.58■■□□□ 1.85
SPTLC2O15270 RARRES2P2-201ENST00000394842 485 ntBASIC26.58■■□□□ 1.85
SPTLC2O15270 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SPTLC2O15270 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SPTLC2O15270 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.57■■□□□ 1.84
SPTLC2O15270 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
SPTLC2O15270 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.57■■□□□ 1.84
SPTLC2O15270 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SPTLC2O15270 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SPTLC2O15270 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SPTLC2O15270 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.57■■□□□ 1.84
SPTLC2O15270 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.56■■□□□ 1.84
SPTLC2O15270 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SPTLC2O15270 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
SPTLC2O15270 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SPTLC2O15270 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.56■■□□□ 1.84
SPTLC2O15270 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SPTLC2O15270 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
SPTLC2O15270 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
SPTLC2O15270 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.56■■□□□ 1.84
SPTLC2O15270 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.56■■□□□ 1.84
SPTLC2O15270 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.56■■□□□ 1.84
SPTLC2O15270 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
SPTLC2O15270 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SPTLC2O15270 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.55■■□□□ 1.84
SPTLC2O15270 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.55■■□□□ 1.84
SPTLC2O15270 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.55■■□□□ 1.84
SPTLC2O15270 ABCB10P4-201ENST00000566803 2184 ntBASIC26.55■■□□□ 1.84
SPTLC2O15270 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
SPTLC2O15270 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.55■■□□□ 1.84
SPTLC2O15270 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPTLC2O15270 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPTLC2O15270 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPTLC2O15270 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPTLC2O15270 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.54■■□□□ 1.84
SPTLC2O15270 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPTLC2O15270 DUX4L9-201ENST00000449051 1259 ntBASIC26.54■■□□□ 1.84
SPTLC2O15270 HSD17B1P1-201ENST00000590052 955 ntBASIC26.54■■□□□ 1.84
SPTLC2O15270 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
SPTLC2O15270 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SPTLC2O15270 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.54■■□□□ 1.84
SPTLC2O15270 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SPTLC2O15270 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.53■■□□□ 1.84
SPTLC2O15270 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SPTLC2O15270 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SPTLC2O15270 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.53■■□□□ 1.84
SPTLC2O15270 AC087393.1-201ENST00000582896 145 ntBASIC26.53■■□□□ 1.84
SPTLC2O15270 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SPTLC2O15270 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SPTLC2O15270 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
SPTLC2O15270 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SPTLC2O15270 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.52■■□□□ 1.84
SPTLC2O15270 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.52■■□□□ 1.84
SPTLC2O15270 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SPTLC2O15270 MIR6765-201ENST00000614092 87 ntBASIC26.52■■□□□ 1.84
SPTLC2O15270 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SPTLC2O15270 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SPTLC2O15270 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SPTLC2O15270 U85056.1-201ENST00000616429 682 ntBASIC26.51■■□□□ 1.83
SPTLC2O15270 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.51■■□□□ 1.83
SPTLC2O15270 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
SPTLC2O15270 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.51■■□□□ 1.83
SPTLC2O15270 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.5■■□□□ 1.83
SPTLC2O15270 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
SPTLC2O15270 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SPTLC2O15270 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.5■■□□□ 1.83
SPTLC2O15270 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SPTLC2O15270 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SPTLC2O15270 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPTLC2O15270 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.49■■□□□ 1.83
SPTLC2O15270 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.49■■□□□ 1.83
SPTLC2O15270 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
SPTLC2O15270 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.49■■□□□ 1.83
SPTLC2O15270 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.49■■□□□ 1.83
SPTLC2O15270 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.49■■□□□ 1.83
SPTLC2O15270 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPTLC2O15270 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPTLC2O15270 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms