Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TSPAN4O14817 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN4O14817 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TSPAN4O14817 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN4O14817 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN4O14817 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN4O14817 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN4O14817 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
TSPAN4O14817 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN4O14817 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN4O14817 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TSPAN4O14817 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TSPAN4O14817 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN4O14817 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.32■□□□□ 0.68
TSPAN4O14817 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
TSPAN4O14817 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TSPAN4O14817 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN4O14817 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TSPAN4O14817 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN4O14817 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN4O14817 WHAMMP2-203ENST00000563942 1603 ntBASIC19.32■□□□□ 0.68
TSPAN4O14817 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN4O14817 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.32■□□□□ 0.68
TSPAN4O14817 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.32■□□□□ 0.68
TSPAN4O14817 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN4O14817 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN4O14817 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.31■□□□□ 0.68
TSPAN4O14817 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN4O14817 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN4O14817 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.31■□□□□ 0.68
TSPAN4O14817 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.31■□□□□ 0.68
TSPAN4O14817 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TSPAN4O14817 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN4O14817 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN4O14817 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN4O14817 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN4O14817 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN4O14817 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.3■□□□□ 0.68
TSPAN4O14817 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TSPAN4O14817 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.3■□□□□ 0.68
TSPAN4O14817 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN4O14817 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN4O14817 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN4O14817 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN4O14817 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.3■□□□□ 0.68
TSPAN4O14817 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN4O14817 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.29■□□□□ 0.68
TSPAN4O14817 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TSPAN4O14817 AC007375.3-201ENST00000600936 2314 ntBASIC19.29■□□□□ 0.68
TSPAN4O14817 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN4O14817 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN4O14817 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.29■□□□□ 0.68
TSPAN4O14817 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TSPAN4O14817 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN4O14817 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN4O14817 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN4O14817 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN4O14817 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TSPAN4O14817 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.28■□□□□ 0.68
TSPAN4O14817 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN4O14817 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN4O14817 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.28■□□□□ 0.68
TSPAN4O14817 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.28■□□□□ 0.68
TSPAN4O14817 MIR7108-201ENST00000614319 87 ntBASIC19.28■□□□□ 0.68
TSPAN4O14817 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN4O14817 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN4O14817 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.28■□□□□ 0.68
TSPAN4O14817 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN4O14817 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN4O14817 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN4O14817 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
TSPAN4O14817 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.28■□□□□ 0.68
TSPAN4O14817 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.28■□□□□ 0.68
TSPAN4O14817 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.27■□□□□ 0.68
TSPAN4O14817 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TSPAN4O14817 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TSPAN4O14817 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN4O14817 DUX4L11-201ENST00000611504 1267 ntBASIC19.27■□□□□ 0.68
TSPAN4O14817 DUX4L12-201ENST00000614593 1267 ntBASIC19.27■□□□□ 0.68
TSPAN4O14817 DUX4L14-201ENST00000621227 1267 ntBASIC19.27■□□□□ 0.68
TSPAN4O14817 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN4O14817 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TSPAN4O14817 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.27■□□□□ 0.68
TSPAN4O14817 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TSPAN4O14817 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TSPAN4O14817 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
TSPAN4O14817 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TSPAN4O14817 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN4O14817 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN4O14817 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN4O14817 LINC01124-201ENST00000409786 2117 ntBASIC19.25■□□□□ 0.67
TSPAN4O14817 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN4O14817 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN4O14817 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN4O14817 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN4O14817 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.25■□□□□ 0.67
TSPAN4O14817 AC022211.4-201ENST00000625094 2161 ntBASIC19.25■□□□□ 0.67
TSPAN4O14817 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN4O14817 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN4O14817 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms