Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.3■□□□□ 0.68
MSGN1A6NI15 AC060814.1-201ENST00000554326 538 ntBASIC19.3■□□□□ 0.68
MSGN1A6NI15 MIR4449-201ENST00000578365 66 ntBASIC19.3■□□□□ 0.68
MSGN1A6NI15 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MSGN1A6NI15 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MSGN1A6NI15 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MSGN1A6NI15 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
MSGN1A6NI15 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSGN1A6NI15 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSGN1A6NI15 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.29■□□□□ 0.68
MSGN1A6NI15 AC022413.1-201ENST00000624602 984 ntBASIC19.29■□□□□ 0.68
MSGN1A6NI15 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MSGN1A6NI15 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
MSGN1A6NI15 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
MSGN1A6NI15 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.28■□□□□ 0.68
MSGN1A6NI15 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MSGN1A6NI15 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MSGN1A6NI15 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.28■□□□□ 0.68
MSGN1A6NI15 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
MSGN1A6NI15 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.28■□□□□ 0.68
MSGN1A6NI15 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MSGN1A6NI15 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MSGN1A6NI15 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSGN1A6NI15 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.28■□□□□ 0.68
MSGN1A6NI15 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MSGN1A6NI15 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.28■□□□□ 0.68
MSGN1A6NI15 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSGN1A6NI15 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSGN1A6NI15 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MSGN1A6NI15 AL117328.2-201ENST00000624617 1940 ntBASIC19.27■□□□□ 0.68
MSGN1A6NI15 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSGN1A6NI15 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
MSGN1A6NI15 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSGN1A6NI15 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.27■□□□□ 0.68
MSGN1A6NI15 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MSGN1A6NI15 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.27■□□□□ 0.68
MSGN1A6NI15 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MSGN1A6NI15 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MSGN1A6NI15 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MSGN1A6NI15 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MSGN1A6NI15 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSGN1A6NI15 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSGN1A6NI15 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSGN1A6NI15 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSGN1A6NI15 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSGN1A6NI15 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.26■□□□□ 0.67
MSGN1A6NI15 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MSGN1A6NI15 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSGN1A6NI15 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
MSGN1A6NI15 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSGN1A6NI15 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSGN1A6NI15 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSGN1A6NI15 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSGN1A6NI15 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSGN1A6NI15 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSGN1A6NI15 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSGN1A6NI15 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSGN1A6NI15 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.25■□□□□ 0.67
MSGN1A6NI15 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MSGN1A6NI15 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSGN1A6NI15 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSGN1A6NI15 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.24■□□□□ 0.67
MSGN1A6NI15 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSGN1A6NI15 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MSGN1A6NI15 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSGN1A6NI15 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
MSGN1A6NI15 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSGN1A6NI15 AL157400.5-201ENST00000507624 621 ntBASIC19.24■□□□□ 0.67
MSGN1A6NI15 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.24■□□□□ 0.67
MSGN1A6NI15 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSGN1A6NI15 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSGN1A6NI15 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSGN1A6NI15 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.24■□□□□ 0.67
MSGN1A6NI15 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.24■□□□□ 0.67
MSGN1A6NI15 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.23■□□□□ 0.67
MSGN1A6NI15 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MSGN1A6NI15 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MSGN1A6NI15 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSGN1A6NI15 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSGN1A6NI15 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSGN1A6NI15 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MSGN1A6NI15 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MSGN1A6NI15 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MSGN1A6NI15 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSGN1A6NI15 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.23■□□□□ 0.67
MSGN1A6NI15 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.23■□□□□ 0.67
MSGN1A6NI15 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSGN1A6NI15 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.23■□□□□ 0.67
MSGN1A6NI15 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MSGN1A6NI15 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MSGN1A6NI15 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MSGN1A6NI15 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MSGN1A6NI15 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.22■□□□□ 0.67
MSGN1A6NI15 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.22■□□□□ 0.67
MSGN1A6NI15 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSGN1A6NI15 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSGN1A6NI15 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSGN1A6NI15 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MSGN1A6NI15 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.22■□□□□ 0.67
MSGN1A6NI15 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms