Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC009533.2-201ENST00000543664 586 ntBASIC18.81■□□□□ 0.6
RTN4Q9NQC3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 AC083964.2-201ENST00000623988 2396 ntBASIC18.81■□□□□ 0.6
RTN4Q9NQC3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 KRT8P26-201ENST00000534154 1276 ntBASIC18.8■□□□□ 0.6
RTN4Q9NQC3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 AC011467.2-201ENST00000598425 242 ntBASIC18.8■□□□□ 0.6
RTN4Q9NQC3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 RPL32P3-206ENST00000510078 2161 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC18.8■□□□□ 0.6
RTN4Q9NQC3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 AL136038.3-201ENST00000561909 1096 ntBASIC18.79■□□□□ 0.6
RTN4Q9NQC3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 NUTM2HP-201ENST00000442076 2498 ntBASIC18.79■□□□□ 0.6
RTN4Q9NQC3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC18.79■□□□□ 0.6
RTN4Q9NQC3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4Q9NQC3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4Q9NQC3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4Q9NQC3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.78■□□□□ 0.6
RTN4Q9NQC3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTN4Q9NQC3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms