Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.16■□□□□ 0.18
SIX5Q8N196 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.15■□□□□ 0.18
SIX5Q8N196 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.15■□□□□ 0.18
SIX5Q8N196 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SIX5Q8N196 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SIX5Q8N196 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
SIX5Q8N196 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.15■□□□□ 0.18
SIX5Q8N196 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
SIX5Q8N196 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.15■□□□□ 0.18
SIX5Q8N196 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.15■□□□□ 0.18
SIX5Q8N196 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 AC015967.2-201ENST00000624092 234 ntBASIC16.15■□□□□ 0.18
SIX5Q8N196 AC006435.4-201ENST00000625037 234 ntBASIC16.15■□□□□ 0.18
SIX5Q8N196 LINC01144-201ENST00000626198 1710 ntBASIC16.15■□□□□ 0.18
SIX5Q8N196 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SIX5Q8N196 AL356737.1-201ENST00000634391 234 ntBASIC16.15■□□□□ 0.18
SIX5Q8N196 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SIX5Q8N196 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SIX5Q8N196 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.15■□□□□ 0.18
SIX5Q8N196 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SIX5Q8N196 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX5Q8N196 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SIX5Q8N196 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.15■□□□□ 0.18
SIX5Q8N196 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.14■□□□□ 0.18
SIX5Q8N196 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SIX5Q8N196 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SIX5Q8N196 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.14■□□□□ 0.17
SIX5Q8N196 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX5Q8N196 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SIX5Q8N196 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SIX5Q8N196 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SIX5Q8N196 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX5Q8N196 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX5Q8N196 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.14■□□□□ 0.17
SIX5Q8N196 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 NIFKP4-201ENST00000567275 1192 ntBASIC16.14■□□□□ 0.17
SIX5Q8N196 MIR4741-201ENST00000579822 90 ntBASIC16.14■□□□□ 0.17
SIX5Q8N196 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX5Q8N196 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.14■□□□□ 0.17
SIX5Q8N196 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
SIX5Q8N196 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SIX5Q8N196 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.14■□□□□ 0.17
SIX5Q8N196 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX5Q8N196 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.14■□□□□ 0.17
SIX5Q8N196 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.14■□□□□ 0.17
SIX5Q8N196 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX5Q8N196 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX5Q8N196 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SIX5Q8N196 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.13■□□□□ 0.17
SIX5Q8N196 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIX5Q8N196 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms